EY664898

Overview
NameEY664898
Unique NameEY664898
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9358 contig Csv1_Contig9358:24..936. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664898 vs. ExPASy Swiss-Prot
Match: HDHD3_MOUSE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus GN=Hdhd3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.094e-12
Identity = 54/186 (29.03%), Postives = 83/186 (44.62%), Query Frame = 2
Query:  281 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG---RPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVXD 808
            + L  D   TL+   +P+ + Y      +GV   +  +   +R+AY           ++ G   R +W+ +V  +    G  D+Q      ++LY  +++   W + +  AE   K  RK G+KLAVVSNFD RL  +L  L     FD           KP+P IF +A     V+P  A HV D
Sbjct:    8 RLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSRQWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEG-AEMTLKGCRKRGLKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRACVEPAVAAHVGD 192          
BLAST of EY664898 vs. ExPASy Swiss-Prot
Match: HDHD3_XENLA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.176e-11
Identity = 58/186 (31.18%), Postives = 83/186 (44.62%), Query Frame = 2
Query:  296 DAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG-------RPFWQFIVSSS---TGCSDSQYFE----ELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVXDD 811
            D   TLL    P+ Q Y    +K G+  +   +   +R AY      SRL + N G       R +W  +V  +   +G  DS   +    +LY  ++T   W L  P A +   +    G+++AV+SNFD RL  +LR    + +FD           KP+  IF KA  L  V P  AVHV DD
Sbjct:    9 DVKDTLLRVRVPVGQQYYAEAKKRGLCVNPGTLETSFRNAYRSH---SRL-FPNYGLAQGMSSRQWWLDVVLQTFRLSGIEDSDTVQSLAKQLYQDFSTAHNWALV-PGAREALDSCTNLGLRMAVISNFDRRLEELLRQCCLERYFDFVVTAESAGVAKPHLGIFHKALSLAKVPPHQAVHVGDD 189          
BLAST of EY664898 vs. ExPASy Swiss-Prot
Match: HDHD3_HUMAN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens GN=HDHD3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.834e-11
Identity = 52/187 (27.81%), Postives = 81/187 (43.32%), Query Frame = 2
Query:  281 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVXDD 811
            + L  D   TLL    P+ + Y      +G+    + +   +R+AY      +    L +    R +W  +V  +    G  D+Q      E+LY  ++    W + D  AE   +  R  G++LAV+SNFD RL  +L  L     FD           KP+P IF +A  L  ++P  A HV D+
Sbjct:    8 RLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDG-AEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDN 193          
BLAST of EY664898 vs. ExPASy Swiss-Prot
Match: HDHD3_BOVIN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus GN=HDHD3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.834e-11
Identity = 53/195 (27.18%), Postives = 83/195 (42.56%), Query Frame = 2
Query:  281 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPXDAVHVXDDRRMMXWGA 835
            + L  D   TLL    P+   Y      +G+      +   +++AY+   Q +    L +      +W  +V  +    G  D+Q      E+LY  +++   W + +  AE   +  RK G+KLAVVSNFD RL  +L  +     FD           KP+P IF +A  L  V+P    H+ D  +    GA
Sbjct:    8 RLLTWDVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSHQWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEG-AEATLRGCRKRGLKLAVVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEALHLAQVEPAVGAHIGDSYQRDYKGA 201          
The following BLAST results are available for this feature:
BLAST of EY664898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
HDHD3_MOUSE3.094e-1229.03Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_XENLA1.176e-1131.18Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_HUMAN5.834e-1127.81Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_BOVIN5.834e-1127.18Haloacid dehalogenase-like hydrolase domain-contai... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-F12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664898 ID=EY664898; Name=EY664898; organism=Citrus sinensis; type=EST; length=912bp
CGCCTGCCAGTATTGGTCCGGNATTCCCGGCCCGACCCACGCCGTCCGGA
ATTGAGGAATGGCTCTAATGACAACGACAGTAAGAACCAAACTCCGTAGA
CTCATTGCAAGTGCTGGTAATCGCAGCAATGGCTCAATCTCAATCTCAAT
CTGCCGCCAGTTATCTTCGGCGACGGAAGCAGCAGAGGCCGTTGGATCAA
GAGGCGTGGTGGGTTTGGGGGTATTTGGATTGAAAGACTATGAAGATTAT
AGGCGTTCTCTTTATGGAGACATCACACATAAAGCTTTGCTCGTTGACGC
TGCTGGTACTCTCCTTGTTCCTTCTCAGCCCATGGCCCAGATATATAGAG
AGATTGGAGAGAAGTATGGTGTTGCCTACTCTGAGGCGGAGATATTGAAC
AGATACAGAAGGGCTTATGAGCAGCCATGGGGAGGATCTCGTCTCAGATA
TGTGAATGATGGGAGACCCTTCTGGCAATTTATAGTTAGTTCGTCTACTG
GTTGTTCAGATTCCCAGTATTTTGAAGAACTATATAACTACTATACCACT
GAAAAGGCATGGCACCTCTGTGATCCTGAAGCTGAAAAGGTATTTAAGGC
TATCAGAAAAGCAGGAGTCAAATTGGCTGTTGTGTCAAACTTTGATACTC
GGTTAAGACCTGTGTTGCGAGCTCTAAATTGTGATCATTGGTTCGATGCT
GTTGCAGTGTCAGCTGAAGTTGAAGCAGAGAAGCCAAATCCAACAATATT
CCTAAAAGCTTGTGATTTGTTGGGAGTAAAACCTGNAGATGCTGTACATG
TANGGGATGATCGTAGGATGATGTGNTGGGGTGCANGGATGCANGTTGTG
ATGCTTGGCTTTGGGGAAATGATGTCCCTNCCTTTNAAGAGTTGCTCAAG
GNATGGGGTCAA
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