EY664892

Overview
NameEY664892
Unique NameEY664892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7260 contig Csv1_Contig7260:117..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY664892 vs. ExPASy Swiss-Prot
Match: Y1934_ARATH (Uncharacterized protein At1g09340, chloroplastic OS=Arabidopsis thaliana GN=At1g09340 PE=1 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 1.297e-116
Identity = 210/291 (72.16%), Postives = 239/291 (82.13%), Query Frame = 2 
Query:   11 MASTVVVQHQTQPXXXXXXXXXXXXNGTRIHSQIQYRRKVLQPKVGLQITASSEKNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQSTQLGHVKDLARGLVXGLGMKKQQAGIHIXRESMYP*W--IXXACAK 877
            MA  +++Q Q QP            NG ++H Q+QY+RKV QPK  L ++ASSEK ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKDYDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P SGIQ +QLGHVKDLA   +  LG +K    I       Y  +  +  ACAK
Sbjct:    1 MAKMMMLQ-QHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAK 290
[Close]
BLAST of EY664892 vs. ExPASy Swiss-Prot
Match: Y3314_ARATH (Uncharacterized protein At3g63140, chloroplastic OS=Arabidopsis thaliana GN=At3g63140 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 75/230 (32.61%), Postives = 118/230 (51.30%), Query Frame = 2 
Query:  158 TASSEKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQSTQLGHVKDLARGLVXGLGMKKQQAG 820
            +   +KN+LI+    GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S      G +  +     V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +PIPGSG+Q T + HV+DL+  L   +   +  +G
Sbjct:   75 SVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSG-----GGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASG 295
The following BLAST results are available for this feature:
BLAST of EY664892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1934_ARATH1.297e-11672.16Uncharacterized protein At1g09340, chloroplastic O... [more]
Y3314_ARATH1.054e-2532.61Uncharacterized protein At3g63140, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664892 ID=EY664892; Name=EY664892; organism=Citrus sinensis; type=EST; length=889bp
AGCAGCAACCATGGCAAGCACGGTGGTTGTGCAGCACCAAACACAGCCTT
CTTTCTCCACCCTCACTTCGTCTCTTTCTGACTTCAATGGCACTAGAATC
CACTCTCAAATTCAGTATAGGAGAAAGGTGTTGCAGCCAAAAGTAGGGCT
GCAAATTACAGCTTCTAGTGAAAAGAACATTCTTATAATGGGAGGAACTC
GATTCATTGGTGTATTTCTTTCAAGACTCCTAGTCAAAGAGGGTCATCAG
GTGACCTTGTTTACTAGGGGAAAGGCACCAATCGCCCAACAATTGCCCGG
TGAATCAGACCAGGAATTCGCCGAATTTTCTTCCAAGATCTTGCATTTGA
AAGGAGACAGAAAGGACTATGATTTTGTGAAATCCAGTCTCTCTGCCAAA
GGCTTTGATGTTGTTTATGATATAAATGGACGAGAGGCAGATGAAGTCGA
ACCCATATTGGATGCACTGCCAAATCTAGAACAGTTCATCTACTGCTCCT
CAGCTGGTGTTTATCTAAAATCTGACCTTTTACCACACTGTGAGACCGAC
ACTGTTGATCCAAAGAGCAGGCACAAGGGAAAGCTTAATACAGAGTCCGT
ACTGGAATCAAAAGGCGTGAACTGGACTTCTTTAAGGCCAGTCTATATAT
ATGGTCCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCACCGTTTG
AAAGCAGGTCGCCCAATTCCAATCCCAGGCTCCGGAATACAAAGTACCCA
GCTTGGTCATGTAAAGGACTTGGCTAGGGGCCTTGTTCANGGTCTTGGTA
TGAAAAAGCAGCAGGCAGGTATTCACATCTNCAGAGAAAGTATGTACCCT
TGATGGATANCCANNGCATGTGCAAAGCTGCTGGATTCC
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