EY664887

Overview
NameEY664887
Unique NameEY664887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: SPTC2_HUMAN (Serine palmitoyltransferase 2 OS=Homo sapiens GN=SPTLC2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.716e-45
Identity = 64/115 (55.65%), Postives = 87/115 (75.65%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            LD+AHSIGA+G TGRGV E   +D  DVD+MMGTFTKSFG+ GGYI G KELI YL+    + +YATS+SPP  EQII+++K I+G+DG+S G + + ++ EN+ +FR  L++ G
Sbjct:  343 LDEAHSIGALGPTGRGVVEYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMG 457          

HSP 2 Score: 68.5514 bits (166), Expect = 1.716e-45
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  336 KKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLXQNXXXXXXXXXXXXLLLARARICISSSHTKEDL 539
            K+MGF + G+ DSPV+P+MLY PAKI AF RE L +N            ++ +RAR C+S++HTKE L
Sbjct:  454 KEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEIL 521          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: SPTC2_MOUSE (Serine palmitoyltransferase 2 OS=Mus musculus GN=Sptlc2 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.427e-44
Identity = 62/115 (53.91%), Postives = 87/115 (75.65%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            LD+AHSIGA+G +GRGV +   +D  DVD+MMGTFTKSFG+ GGYI G KELI YL+    + +YATS+SPP  EQII+++K I+G+DG+S G + + ++ EN+ +FR  L++ G
Sbjct:  341 LDEAHSIGALGPSGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSMSPPVMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMG 455          

HSP 2 Score: 68.5514 bits (166), Expect = 1.427e-44
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  336 KKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLXQNXXXXXXXXXXXXLLLARARICISSSHTKEDL 539
            K+MGF + G+ DSPV+P+MLY PAKI AF RE L +N            ++ +RAR C+S++HTKE L
Sbjct:  452 KEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEIL 519          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: SPTC2_DICDI (Serine palmitoyltransferase 2 OS=Dictyostelium discoideum GN=sptB PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.428e-44
Identity = 56/115 (48.70%), Postives = 88/115 (76.52%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            +D+AHSIGA+GKTGRG+ +   +D  ++DI+MGT+TKSFG+ GGY+A  K LI +L+ +  + +YA S+SP  A Q + A++VI+GEDG+  GA+KL ++ +NSN+FR ++++ G
Sbjct:  285 IDEAHSIGALGKTGRGIVDYYGIDPKEIDILMGTYTKSFGAIGGYVASDKSLIDHLRQSSFSQVYANSMSPVCAVQALEALRVIMGEDGTDTGAKKLKQLHDNSNYFREKIREMG 399          

HSP 2 Score: 70.8626 bits (172), Expect = 2.428e-44
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  336 KKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLXQNXXXXXXXXXXXXLLLARARICISSSHTKEDL 539
            ++MGF +LG+ DSPV+P+ML+NPAK+ AFSR CL ++            L   R R CIS+SHT EDL
Sbjct:  396 REMGFVILGNKDSPVIPLMLFNPAKLSAFSRLCLEKHIAVVVVGYPATPLTEPRTRFCISASHTIEDL 463          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: SPTC2_CRIGR (Serine palmitoyltransferase 2 OS=Cricetulus griseus GN=SPTLC2 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 9.110e-44
Identity = 61/115 (53.04%), Postives = 86/115 (74.78%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            LD+AHSIGA+G +GRGV +   +D  DVD+MMGTFTKSFG+ GGYI G K LI YL+    + +YATS+SPP  EQII+++K I+G+DG+S G + + ++ EN+ +FR  L++ G
Sbjct:  341 LDEAHSIGALGPSGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKALIDYLRTHSHSAVYATSMSPPVMEQIITSMKCIMGQDGTSLGKECVQQLAENTKYFRRRLKEMG 455          

HSP 2 Score: 68.5514 bits (166), Expect = 9.110e-44
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  336 KKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLXQNXXXXXXXXXXXXLLLARARICISSSHTKEDL 539
            K+MGF + G+ DSPV+P+MLY PAKI AF RE L +N            ++ +RAR C+S++HTKE L
Sbjct:  452 KEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNVGVVVVGFPATPIIESRARFCLSAAHTKEIL 519          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: SPTC3_HUMAN (Serine palmitoyltransferase 3 OS=Homo sapiens GN=SPTLC3 PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 6.815e-41
Identity = 61/115 (53.04%), Postives = 90/115 (78.26%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            +D+AHSIGAVG TGRGV E   +D  +VD++MGTFTKSFG+ GGYIAG K+L+ YL+    + +YA+S+SPP AEQII ++K+I+G DG+++G Q++ ++ +N+ +FR  LQ+ G
Sbjct:  335 IDEAHSIGAVGPTGRGVTEFFGLDPHEVDVLMGTFTKSFGASGGYIAGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMG 449          

HSP 2 Score: 54.299 bits (129), Expect = 6.815e-41
Identity = 25/68 (36.76%), Postives = 41/68 (60.29%), Query Frame = 3
Query:  336 KKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLXQNXXXXXXXXXXXXLLLARARICISSSHTKEDL 539
            ++MGF + G+ ++ V+P++LY P K+ AF+R  L +             L  ARAR C+S++HT+E L
Sbjct:  446 QEMGFIIYGNENASVVPLLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREML 513          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: SPTC3_MOUSE (Serine palmitoyltransferase 3 OS=Mus musculus GN=Sptlc3 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.681e-36
Identity = 53/115 (46.09%), Postives = 79/115 (68.70%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            +D+AHSIG  G TGRGV EL  +D  D+D+ MGTFTKSF   GGYI G KE++ YL+    +  YATS+SP  A Q+I ++K+ +G +G+  G +++ +++EN  +FR  L++ G
Sbjct:  335 IDEAHSIGCTGPTGRGVRELFGLDPEDIDVYMGTFTKSFSGSGGYIGGKKEIVDYLRMQSHSTTYATSMSPVVAAQLIRSLKITMGYEGNIGGMERIQQLKENIKYFRRRLKEMG 449          

HSP 2 Score: 55.0694 bits (131), Expect = 2.681e-36
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 3
Query:  336 KKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLXQNXXXXXXXXXXXXLLLARARICISSSHTKEDL 539
            K+MGF + G++ SPV+P++LY PAK+ AFSR  L +             L   RAR  +SS+HT+E L
Sbjct:  446 KEMGFIIYGNDFSPVIPVLLYMPAKVSAFSRFLLKKKISVVVVGFPATSLPEGRARFSMSSAHTREML 513          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: LCB2_SCHPO (Serine palmitoyltransferase 2 OS=Schizosaccharomyces pombe GN=lcb2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.767e-35
Identity = 49/115 (42.61%), Postives = 74/115 (64.35%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            +D+AHSIGA+G  G G+C+   + T  VDI+MGTFTKSFG+ GGYI+ +  +I  L+ T P ++YA S+SP    QI S+   I+    +S G +++ R+  NS + R  L++ G
Sbjct:  362 IDEAHSIGAIGPRGGGICDYFGISTDHVDILMGTFTKSFGAAGGYISATPNIINKLRVTNPGYVYAESMSPAVLAQIKSSFLEIMDNSPTSAGLERIERLAFNSRYIRLGLKRLG 476          

HSP 2 Score: 65.855 bits (159), Expect = 3.767e-35
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 3
Query:  336 KKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLXQNXXXXXXXXXXXXLLLARARICISSSHTKEDL 539
            K++GF + G++DSPV+P++LYNP KI AFS E L +             LL +R R C S+SH K D+
Sbjct:  473 KRLGFIIFGNDDSPVVPLLLYNPGKINAFSHEMLKRGIAVVVVGYPACPLLTSRVRFCFSASHNKADM 540          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: LCB2_YEAST (Serine palmitoyltransferase 2 OS=Saccharomyces cerevisiae GN=LCB2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.664e-23
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            +D+AHSIGA+G TGRGVCE+  VD  DVDI+MGTFTKSFG+ GGYIA  + +I  L+       Y+ S+  P   Q IS+++ I GE    +G ++L RI  NS + R  LQ+ G
Sbjct:  330 IDEAHSIGAMGPTGRGVCEIFGVDPKDVDILMGTFTKSFGAAGGYIAADQWIIDRLRLDLTTVSYSESMPAPVLAQTISSLQTISGEICPGQGTERLQRIAFNSRYLRLALQRLG 444          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: LCB2_KLULA (Serine palmitoyltransferase 2 OS=Kluyveromyces lactis GN=LCB2 PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.938e-20
Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            +D+AHSIGA+G +GRGVC+   +  +D+DIMMGT TKSFG+ GGYIA  K +I   +       Y      P   QI S++K I G+     G ++L RI  N+ + R  LQ+ G
Sbjct:  329 VDEAHSIGAMGPSGRGVCDFFGIPCSDIDIMMGTLTKSFGAAGGYIAADKWIIDRFRLDLTTPHYGEPTPAPVLAQIASSLKTITGDINPGEGQERLQRIAFNARYLRLALQRLG 443          
BLAST of EY664887 vs. ExPASy Swiss-Prot
Match: BIKB_FERNB (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1307 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.279e-15
Identity = 41/115 (35.65%), Postives = 71/115 (61.74%), Query Frame = 2
Query:    2 LDDAHSIGAVGKTGRGVCELL*VDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKNG 346
            +DDAH  G +G+ GRG+ +   +    VD+ +GT +K+FG  GGYIAG + LI+YLK      L++T ++P      + A+K++   D      +++ R+ +N+N+F+SE++K G
Sbjct:  208 VDDAHGEGVLGRGGRGIVDHFGLH-GRVDMEIGTLSKAFGVLGGYIAGKETLIRYLKQKARPFLFSTGLTPADVAACLEAVKILQESD------ERVKRLWDNANYFKSEMKKLG 315          
The following BLAST results are available for this feature:
BLAST of EY664887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SPTC2_HUMAN1.716e-4555.65Serine palmitoyltransferase 2 OS=Homo sapiens GN=S... [more]
SPTC2_MOUSE1.427e-4453.91Serine palmitoyltransferase 2 OS=Mus musculus GN=S... [more]
SPTC2_DICDI2.428e-4448.70Serine palmitoyltransferase 2 OS=Dictyostelium dis... [more]
SPTC2_CRIGR9.110e-4453.04Serine palmitoyltransferase 2 OS=Cricetulus griseu... [more]
SPTC3_HUMAN6.815e-4153.04Serine palmitoyltransferase 3 OS=Homo sapiens GN=S... [more]
SPTC3_MOUSE2.681e-3646.09Serine palmitoyltransferase 3 OS=Mus musculus GN=S... [more]
LCB2_SCHPO3.767e-3542.61Serine palmitoyltransferase 2 OS=Schizosaccharomyc... [more]
LCB2_YEAST1.664e-2348.70Serine palmitoyltransferase 2 OS=Saccharomyces cer... [more]
LCB2_KLULA2.938e-2042.61Serine palmitoyltransferase 2 OS=Kluyveromyces lac... [more]
BIKB_FERNB8.279e-1535.65Putative 8-amino-7-oxononanoate synthase/2-amino-3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664887 ID=EY664887; Name=EY664887; organism=Citrus sinensis; type=EST; length=885bp
CTTGGATGATGCCCACAGTATCGGAGCAGTGGGCAAAACCGGAAGAGGGG
TTTGTGAGCTCTTATAAGTTGATACTGCTGATGTGGATATCATGATGGGA
ACTTTTACTAAATCATTTGGATCCTGTGGTGGCTACATTGCAGGATCTAA
GGAACTCATCCAATATTTGAAGTACACTTGTCCTGCTCATCTTTACGCAA
CTTCAATTTCACCACCTGCTGCAGAACAAATAATATCTGCCATAAAGGTT
ATTCTCGGGGAGGATGGTTCCAGCAGAGGTGCCCAGAAACTTGCACGTAT
TCGTGAGAATAGCAACTTTTTTAGGTCCGAACTGCAAAAAAATGGGGTTT
GAGGTTCTTGGAGATAATGATTCTCCAGTGATGCCAATTATGCTTTACAA
TCCTGCCAAAATCCCTGCTTTCTCACGAGAGTGCCTCANGCAGAATGTGG
CTGTTGTGACTGTTGCATTTCCTGCAACCCCACTGCTATTGGCAAGGGCT
CGAATCTGCATATCATCATCGCATACCAAGGAGGACCTGATTAAAGCCTG
GGGGGTATCATTAGGGTTGGTGATCTTGTGGGTATAAATACTTCCCAGCT
GAACCTAGGAAACANATGGGGGATGGAGAGAGGATGAAATTAGAGTACCC
CTAAGCATATTCTTATCTCAGTGTAGCACCTTTAAGCGCAACCCAGCAAG
GACAAGTCAGTGAACTGAACCGAAAAAGACTATATTTGATTTTGTGGCCT
AGGTAAAGGTGGGCACTCTTAATTTTAAGATTCCGGTTAATCATTCCTAT
ATTATTACCCTGCTTCCAAGATTAAGGCCCCCCAGCCATACTAGACAAAT
GAGGGGTTCTTTTGCCTTGTTTCTCACGGAAAAAG
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