EY664883

Overview
NameEY664883
Unique NameEY664883
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length500
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8410 contig Csv1_Contig8410:604..1103. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY664883 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.136e-15
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 2 
Query:    2 YGGDKYVNGEIIPCTYPTYQPNKRKESKYVSKRYERRRDGPPAERR 139
            YGGDKYVNGEIIPC YPTYQP + + SKY SK Y R+RDGPPAE+R
Sbjct:  173 YGGDKYVNGEIIPCQYPTYQPKQSRSSKYKSKAYVRQRDGPPAEQR 218
The following BLAST results are available for this feature:
BLAST of EY664883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DAG_ANTMA2.136e-1576.09DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664883 ID=EY664883; Name=EY664883; organism=Citrus sinensis; type=EST; length=500bp
TTATGGAGGTGATAAATATGTCAATGGAGAGATCATTCCCTGCACATATC
CCACTTATCAGCCAAACAAACGAAAAGAATCAAAATATGTGAGCAAAAGA
TATGAGAGACGAAGAGATGGCCCTCCTGCTGAAAGAAGAACGAGACAAGC
AGCTGGTCAGTCAGAATCAGCGTCGTCATAAGTTTGCGACTCCAAAAGCC
AATCATACTACTGCCACCATGCGTATCAGCAGTCTAATCAAGACACCTGT
TTTATGAGTTCTCAAGCTGTTCTTGGTAGTTTTTGTAATGGATATCATTT
AATGTAGTTAGGATAGAAATTCTCTGGTAATCGCCATCATTTAGTTTTGT
GCCTCTGGGCTTGTTATTTGAAATGTTGTCCACTGACATTTCATGGTTGC
CGAAGGTCTGCTGTCTATTGTCTAAAAGTACTGTTGTGTCAGATTTCTCA
TTTAGCTTTAATATATAAAGTTAATTTTGCCGTAAAAAAAAAAAAAAAAA
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