EY664874

Overview
NameEY664874
Unique NameEY664874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7653 contig Csv1_Contig7653:84..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664874 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 70/242 (28.93%), Postives = 102/242 (42.15%), Query Frame = 1
Query:   28 ISFSFPSFAKNSCDNKTLFCYGAIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIK----ISRHQNYT-DRAGDGMTFIFASDKNGPSAKGVGEYLGL--QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLD--VDLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVKVVEKPINLSDIIPTPVYVGFTAATG---DFLKSHEVIXWTFTRS 714
            ISFSF  F   + DN TL     I  SG L +T      +P     GR LY KP+ +  S   T  + +     S  Q YT     DG+ F     K+ P A+G G YLG+   S   + +  LAVE DT  N                  + N + S+      L +G+   V I Y+     L V   Y     +  + + +++  ++P  V VG + ATG   D  ++H+V  W+F  S
Sbjct:    4 ISFSFSEFEPGN-DNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYG-YLGVFNNSKQDNSYQTLAVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQAS 236          
BLAST of EY664874 vs. ExPASy Swiss-Prot
Match: LECS_SOPJA (Seed lectin OS=Sophora japonica PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 68/241 (28.22%), Postives = 100/241 (41.49%), Query Frame = 1
Query:   28 ISFSFPSFAKNSCDNKTLFCYG--AIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIKISRH----QNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPG--DKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDVDL--KSGRAIQVRIYYNPDFGQLSVYAAYSGETLVKVVEKPINLSDIIPTPVYVGFTAATG---DFLKSHEVIXWTFT 708
            +SFSFP FA N  D   L   G   + S G L +T      +PI    GR LY  P+ +         +   S           ++ DG+ F  A   N     G G +LGL  S G    +  +AV+ DT +N                  + N +NS   V    ++G    V I Y      L+V   Y       ++   ++L  I+P  V VGFTAATG    ++++H+V+ W+FT
Sbjct:   41 LSFSFPKFASNQED---LLLQGDALVSSKGELQLTT-VENGVPIWNSTGRALYYAPVHIWDKSTGRVASFATSFSFVVKAPVASKSADGIAFFLAPPNNQIQGPG-GGHLGLFHSSGYNSSYQIIAVDFDTHINA-------WDPNTRHIGIDVNSINSTKTVTWGWQNGEVANVLISYQAATETLTVSLTYPSSQTSYILSAAVDLKSILPEWVRVGFTAATGLTTQYVETHDVLSWSFT 269          
The following BLAST results are available for this feature:
BLAST of EY664874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LEC_ERYCG5.210e-1128.93Lectin OS=Erythrina crista-galli PE=1 SV=1[more]
LECS_SOPJA6.805e-1128.22Seed lectin OS=Sophora japonica PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664874 ID=EY664874; Name=EY664874; organism=Citrus sinensis; type=EST; length=850bp
CCAGCGTCCGCTTTCCGAAGACCACCTATTAGCTTCTCATTTCCCTCATT
CGCCAAAAACAGTTGTGACAATAAGACCCTCTTTTGCTACGGAGCGATTG
AAAGTTCCGGCGCCTTAAGCATCACACCAGGCCCTCCACCAAACCTGCCG
ATCAGAAAGGTTGGACGGGTTTTATACGGCAAGCCTCTGAGTTTACAGCG
ATCTTTTATTGATACCACCATCACCATTAAGATCTCACGCCATCAGAATT
ACACTGATCGTGCCGGAGATGGCATGACGTTCATTTTTGCAAGCGATAAA
AACGGTCCATCAGCAAAGGGCGTCGGCGAATATCTTGGACTGCAGTCTTC
ACCAGGCGATAAATTTCCTCCATTAGCCGTGGAGCTGGACACATGCCTGA
ACAAGAACCTGAATGATCCAGATGATAACCATATTGGCATCGACATAAAC
GGAATCGAATCAAATCCAGTTAATAGTCTGCTTGACGTTGATCTCAAAAG
TGGACGAGCAATCCAGGTTCGAATTTATTACAATCCAGACTTTGGACAAC
TCTCTGTTTATGCGGCATATTCGGGGGAAACACTTGTGAAGGTGGTTGAA
AAACCCATTAACCTGTCAGATATAATTCCAACGCCCGTCTATGTTGGATT
CACAGCAGCTACCGGGGACTTTTTAAAAAGCCATGAGGTTATAANTTGGA
CCTTCACTCGTTCCCAGTGCCCGCTTCTCTCAAGAGAAAAACCTGGTGAT
GCCAATATATTCTAACCGTCCCTTGAAAACATGTCCATNNAATATATCAA
TATAATTAAATCACCCATAAGTGACTGGGCTCTGGATTAAATATTGATAA
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