EY664859

Overview
NameEY664859
Unique NameEY664859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664859 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.554e-29
Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 2
Query:   11 CTNSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCGKSAQGSTDFCKAHGGGKRCSWGHPGSEYGPQSTGPCNSFARGKTGLCALHSG 322
            CT    G T+FC+AHGGG+RC   +CT+SA GRT++CV+HGGG RCK  GCGKSA G   FC+AHGGGK+C            S   C  FARG++GLC +H G
Sbjct:  148 CTKGAEGSTDFCIAHGGGRRCNHEDCTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKC------------SHEDCTGFARGRSGLCLMHGG 239          

HSP 2 Score: 94.3597 bits (233), Expect = 9.451e-19
Identity = 46/104 (44.23%), Postives = 52/104 (50.00%), Query Frame = 2
Query:   11 CTNSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCGKSAQGSTDFCKAHGGGKRCSWGHPGSEYGPQSTGPCNSFARGKTGLCALHSG 322
            CT S  G T FCV HGGG RC    C KSA G   +C  HGGGK+C  E C   A+G +  C  HGGGKRC   +            C   A G +GLC  H G
Sbjct:  173 CTRSAWGRTEFCVKHGGGARCKTYGCGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRSGLCLMHGGGKRCQREN------------CTKSAEGLSGLCISHGG 264          

HSP 3 Score: 93.9745 bits (232), Expect = 1.234e-18
Identity = 46/99 (46.46%), Postives = 57/99 (57.58%), Query Frame = 2
Query:   11 CTNSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCGKSAQGSTDFCKAHGGGKRCSWGHPGSEYGPQSTGPCNSFARGKTGLC 307
            C  S  G   FC AHGGGK+C+  +CT  ARGR+  C+ HGGGKRC+ E C KSA+G +  C +HGGG+RC           QS G C   A+G    C
Sbjct:  198 CGKSASGPLPFCRAHGGGKKCSHEDCTGFARGRSGLCLMHGGGKRCQRENCTKSAEGLSGLCISHGGGRRC-----------QSIG-CTKGAKGSKMFC 284          

HSP 4 Score: 80.8777 bits (198), Expect = 1.081e-14
Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = 2
Query:   11 CTNSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCGKSAQGSTDFCKA 202
            CT    G +  C+ HGGGKRC    CTKSA G +  C+ HGGG+RC+  GC K A+GS  FCKA
Sbjct:  223 CTGFARGRSGLCLMHGGGKRCQRENCTKSAEGLSGLCISHGGGRRCQSIGCTKGAKGSKMFCKA 286          

HSP 5 Score: 74.7146 bits (182), Expect = 7.749e-13
Identity = 35/86 (40.70%), Postives = 43/86 (50.00%), Query Frame = 2
Query:   65 KRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCGKSAQGSTDFCKAHGGGKRCSWGHPGSEYGPQSTGPCNSFARGKTGLCALHSG 322
            K C V  C K AR  +  C+ HGGG+RC+   C K A+G T +CKAHGGG+RC +              C   A G T  C  H G
Sbjct:   91 KLCQVEGCQKGARDASGRCISHGGGRRCQKPDCQKGAEGKTVYCKAHGGGRRCEY------------LGCTKGAEGSTDFCIAHGG 164          
The following BLAST results are available for this feature:
BLAST of EY664859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK19_ARATH1.554e-2953.85Probable WRKY transcription factor 19 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664859 ID=EY664859; Name=EY664859; organism=Citrus sinensis; type=EST; length=884bp
TGGCGGGGTTTGTACAAATAGCGTGCATGGAGGAACCAACTTCTGCGTAG
CACATGGTGGTGGTAAGCGGTGTGCCGTTCCTGAGTGTACAAAGAGTGCA
AGGGGACGAACTGACTATTGTGTCCGTCATGGCGGGGGGAAGAGATGCAA
ATTTGAAGGGTGTGGCAAGAGTGCACAAGGTAGCACTGATTTTTGTAAGG
CTCATGGTGGAGGGAAAAGATGCTCTTGGGGCCATCCTGGTTCAGAATAT
GGTCCCCAATCTACTGGTCCCTGTAACTCATTTGCAAGGGGTAAGACAGG
TCTCTGTGCACTCCACAGTGGCTTGGTGCAGGATAAGAGGGTGCATGGGG
GTTTCACCCTAGGACCTGTGGTGCTGGACCCTAATCTCCACAAACCTGAG
AAGATGAAGGAGGTTGTCACTGCTGATGACATGAATGTGGATATCATGAA
GATGGGGAGTGGTCTTGGAAGTTCAGCTGGCAAATCTTCTGATTCCAAGC
ATGGAGCCTCAAATGTGAGCGACTCAGTTGGGGGAGGTGGATTCCCATCT
GTGCCAGTTTTTGTCCCANAAAGCCGGGTGCATGGTGGAAGCTTGATGGC
AATGCTCGCTGGCAGTTCTGGTGTCAGCTCAAACAGCAGTAAAGTTGTAG
TAGCCTGTGATCCATTGGTGACAGGGAAGTCTAGTATCATGCCTCANAGC
TGGATGTGAATTTCTCTTCACTGCTNNCTAATGCATGGGCATGCTGCANA
TGCTTCTGGNNTNNGGGTGCAGCAGCAGCTAANTTTGTAGCTGTGATCCA
TTTGCAAATGCCTCAGAACTGGATTTGTCCCTTGGTCTCTCANATTGGTC
TTGCACTTGAAGTACTTGTCTGCGTGTTATGTTT
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