EY664857 | Citrus Genome Database

Overview


Name	EY664857
Unique Name	EY664857
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	895

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig12466	contig	Csv1_Contig12466:712..1605.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 7.157e-118
Identity = 186/220 (84.55%), Postives = 196/220 (89.09%), Query Frame = 3

Query:   33 QEGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 692
            ++GKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR W            LVNSKE  P+FEQP+MT++KLL YG M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG
Sbjct:  218 KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437

HSP 2 Score: 63.5438 bits (153), Expect = 7.157e-118
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 1

Query:  727 GGKAAQQM-NVPVPEGCTDPTAENFDPNCRSDDGSCHTRF 843
            GG+AAQQ+ NVPVPEGCTDP A N+DP  RSDDGSC  +F
Sbjct:  437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

HSP 3 Score: 23.8682 bits (50), Expect = 7.157e-118
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 1

Query:   13 REAADIIRKGK 45
            REAADII+KGK
Sbjct:  211 REAADIIKKGK 221

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2)

HSP 1 Score: 372.859 bits (956), Expect = 4.521e-114
Identity = 177/220 (80.45%), Postives = 199/220 (90.45%), Query Frame = 3

Query:   33 QEGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 692
            ++GKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR W            LVNS+E  P FEQP+MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN+DA+++G+FYG
Sbjct:  209 KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 428

HSP 2 Score: 58.9214 bits (141), Expect = 4.521e-114
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 1

Query:  730 GKAAQQM-NVPVPEGCTDPTAENFDPNCRSDDGSC 831
            G+ AQQ  N+PVPEGCTDP A+NFDP  RSDDGSC
Sbjct:  428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSC 462

HSP 3 Score: 23.8682 bits (50), Expect = 4.521e-114
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 1

Query:   13 REAADIIRKGK 45
            REAADII+KGK
Sbjct:  202 REAADIIKKGK 212

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2)

HSP 1 Score: 361.303 bits (926), Expect = 1.089e-112
Identity = 177/220 (80.45%), Postives = 188/220 (85.45%), Query Frame = 3

Query:   33 QEGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 692
            ++GKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVR +            LVNS+E  P FEQP MT EKL+EYGNM+V EQENVKRVQLA+ YLS+AALG+ANADAI  G FYG
Sbjct:  218 KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437

HSP 2 Score: 66.6254 bits (161), Expect = 1.089e-112
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 1

Query:  730 GKAAQQMNVPVPEGCTDPTAENFDPNCRSDDGSCHTRF 843
            GK AQQ+N+PVPEGCTDP AENFDP  RSDDG+C   F
Sbjct:  437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

HSP 3 Score: 23.0978 bits (48), Expect = 1.089e-112
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1

Query:   13 REAADIIRKGK 45
            REAAD+I+KGK
Sbjct:  211 REAADLIKKGK 221

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 4.456e-111
Identity = 173/220 (78.64%), Postives = 196/220 (89.09%), Query Frame = 3

Query:   33 QEGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 692
            ++GKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVR W            LVNS++   TFEQP+MT+EKLLEYG+M+VQEQ+NVKRVQLAD Y+S+AALG+AN DA+++G+FYG
Sbjct:  208 KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427

HSP 2 Score: 57.7658 bits (138), Expect = 4.456e-111
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 1

Query:  730 GKAAQQMNVPVPEGCTDPTAENFDPNCRSDDGSC 831
            GK AQQ  +PVPEGCTD  A+N+DP  RSDDGSC
Sbjct:  427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSC 460

HSP 3 Score: 22.7126 bits (47), Expect = 4.456e-111
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1

Query:   13 REAADIIRKGK 45
            REAAD+I+KGK
Sbjct:  201 REAADMIKKGK 211

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 348.206 bits (892), Expect = 1.055e-106
Identity = 168/219 (76.71%), Postives = 184/219 (84.02%), Query Frame = 3

Query:   36 EGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 692
            +GKMC L INDL+ GAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIF+ D V  + +VKLVD FPGQSIDFFGALRARVY DEVR W            LVNSK+  P FEQP MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S AALG+AN DAI  G F+G
Sbjct:  217 KGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435

HSP 2 Score: 59.6918 bits (143), Expect = 1.055e-106
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 1

Query:  730 GKAAQQMNVPVPEGCTDPTAENFDPNCRSDDGSC 831
            GKAAQQ+++PV +GCTDP A+N+DP  RSDDGSC
Sbjct:  435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSC 468

HSP 3 Score: 23.0978 bits (48), Expect = 1.055e-106
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1

Query:   13 REAADIIRKGKCAA 54
            REAAD+I KGK  A
Sbjct:  209 REAADLIAKGKMCA 222

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 4.633e-106
Identity = 186/220 (84.55%), Postives = 198/220 (90.00%), Query Frame = 3

Query:   33 QEGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 692
            ++GKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR W            LVNSKE  PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEAALG+AN+DA+ +G FYG
Sbjct:  218 RKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

HSP 2 Score: 26.1794 bits (56), Expect = 4.633e-106
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1

Query:   13 REAADIIRKGKCAA 54
            REAADIIRKGK  A
Sbjct:  211 REAADIIRKGKMCA 224

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.611e-103
Identity = 181/218 (83.03%), Postives = 195/218 (89.45%), Query Frame = 3

Query:   33 QEGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNF 686
            ++GKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR W            LVNSKE  PTFEQP+MT++KLL+YGNM+V+EQENVKRVQLADKY+SEAALG+AN DAI+ G F
Sbjct:  218 KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

HSP 2 Score: 23.8682 bits (50), Expect = 1.611e-103
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 1

Query:   13 REAADIIRKGK 45
            REAADII+KGK
Sbjct:  211 REAADIIKKGK 221

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.578e-103
Identity = 181/219 (82.65%), Postives = 196/219 (89.50%), Query Frame = 3

Query:   36 EGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 692
            +GKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR W            LVNS+E  PTF+QP+MT+EKL+EYG+M+VQEQENVKRVQLADKYLSEAALG+AN DA+++G FYG
Sbjct:  206 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424

HSP 2 Score: 23.0978 bits (48), Expect = 3.578e-103
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1

Query:   13 REAADIIRKGK 45
            REAADII KGK
Sbjct:  198 REAADIINKGK 208

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2)

HSP 1 Score: 365.925 bits (938), Expect = 1.243e-100
Identity = 176/218 (80.73%), Postives = 193/218 (88.53%), Query Frame = 3

Query:   36 EGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 689
            +GKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVR W            LVNSKE  PTF+QP+M+++KLL+YGNM+VQEQENVKRVQLADKYL+EAALG AN DAI+SG+F+
Sbjct:  221 KGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

HSP 2 Score: 23.0978 bits (48), Expect = 1.243e-100
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 1

Query:   13 REAADIIRKGKCAA 54
            REAAD+I KGK  A
Sbjct:  213 REAADLIAKGKMCA 226

[Close]

BLAST of EY664857 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 1.310e-100
Identity = 177/219 (80.82%), Postives = 192/219 (87.67%), Query Frame = 3

Query:   33 QEGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 689
            ++G MCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR DNV  +D+VK+VD FPGQSIDFFGALRARVYDDEVR W            L+NS +  PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYL EAALG+ANADAI +G+F+
Sbjct:  222 RKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

The following BLAST results are available for this feature:

BLAST of EY664857 vs. ExPASy Swiss-Prot

BLAST of EY664857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19


Match Name	E-value	Identity	Description
RCA1_LARTR	7.157e-118	84.55	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_ORYSJ	4.521e-114	80.45	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_ARATH	1.089e-112	80.45	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCAA_HORVU	4.456e-111	78.64	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_SPIOL	1.055e-106	76.71	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_MALDO	4.633e-106	84.55	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA2_LARTR	1.611e-103	83.03	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCAB_HORVU	3.578e-103	82.65	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_PHAAU	1.243e-100	80.73	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA1_TOBAC	1.310e-100	80.82	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-071-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY664857 ID=EY664857; Name=EY664857; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGCCGTGAGGCAGCTGACATTATCAGGAAGGGAAAATGTGC
TGCCTCATGATCAATGATCTTGATGCAGGAGCTGGTCGTATGGGTGGCAC
CACCCAGTACACAGTTAACAACCAAATGGTTAACGCCACACTCATGAACA
TTGCTGATAACCCAACTTGTGTCCAACTCCCTGGTATGTACAACAAGGAG
GAGAACCCCCGTGTCCCAATCATAGTCACCGGTAATGACTTCTCAACATT
GTATGCTCCTCTCATCCGTGATGGTCGTATGGAGAAATTCTACTGGGCAC
CTACAAGGGAGGACCGTATTGGTGTGTGCAAGGGTATCTTCAGGAATGAC
AATGTGGCTGATGACGACATTGTCAAGCTTGTTGACACCTTCCCCGGCCA
ATCCATTGATTTCTTTGGAGCCCTGAGGGCCAGAGTCTATGATGATGAGG
TGAGGAATTGGATCTCTGGTATTGGTGTTGGAAGCATTGGCAAGAGCCTT
GTGAACTCAAAGGAAGCAGCCCCAACATTCGAGCAACCAAGGATGACAAT
GGAGAAGCTGCTCGAGTACGGAAACATGATTGTGCAAGAGCAAGAGAATG
TGAAGAGAGTTCAGTTGGCTGACAAGTATTTGAGTGAGGCCGCTCTTGGT
GAAGCTAATGCAGATGCTATTCAGAGTGGAAATTTCTATGGTTAGCCCCC
TTGATCCTAGCTAANGAGCCTTGATGGGAGGCAAAGCAGCCCAGCAAATG
AATGTTCCAGTTCCTGAAGGATGTACTGATCCTACTGCAGAAAACTTTGA
TCCAAACTGCAGAAGTGATGATGGAAGCTGCCATACACGCTTTAGGCCTT
GNNTCTAAGGNTGAGAANTGTCGACTTTGCTTANGATGTGAGAAT