EY664849

Overview
NameEY664849
Unique NameEY664849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7971 contig Csv1_Contig7971:1..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664849 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 8.217e-21
Identity = 66/160 (41.25%), Postives = 85/160 (53.12%), Query Frame = 2
Query:  263 LVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTS---ASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSGISDFSPA 733
            LVS    F +GFF    S   YLG+WY +      F Y        VWVANR+NP+ +  G+L I     NL +L +    +  T+V      S   A LL  GN V+ + NS+ + +  LWQSFDYPTDTLLP MKLG +L+TG   FL S  S   P+
Sbjct:   49 LVSPGNVFELGFFKTTSSSRWYLGIWYKK------FPYRTY-----VWVANRDNPLSNDIGTLKISGN--NLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQF-LWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPS 194          
BLAST of EY664849 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.078e-20
Identity = 68/162 (41.98%), Postives = 86/162 (53.09%), Query Frame = 2
Query:  263 LVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTS----ASLLKTGNLVLYEM-NSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSGISDFSPA 733
            LVS    F +GFF  + S   YLG+WY +  D +            VWVANR+NP+ +  G+L I    GN  +L    N  V ++    GN      A LL  GN V+ +  N+D SE   LWQSFDYPTDTLLP MKLG +L+TG   FL S  S   P+
Sbjct:   49 LVSPGNNFELGFFRTNSSSRWYLGIWYKKLLDRTY-----------VWVANRDNPLSNAIGTLKIS---GNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASEY--LWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPS 194          
BLAST of EY664849 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.326e-20
Identity = 67/161 (41.61%), Postives = 87/161 (54.04%), Query Frame = 2
Query:  263 LVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTS---ASLLKTGNLVLYEM-NSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSGISDFSPA 733
            LVS    F +GFF  +     YLG+WY + +D +            VWVANR+NP+ +  G+L I     NL +L +   P+  T++      S   A LL  GN V+ +  N+D SE   LWQSFDYPTDTLLP MKLG NL+TG   FL S  S   P+
Sbjct:   50 LVSPGSIFEVGFFRTNS--RWYLGMWYKKVSDRTY-----------VWVANRDNPLSNAIGTLKISGN--NLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEY--LWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPS 193          
BLAST of EY664849 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.504e-18
Identity = 62/160 (38.75%), Postives = 81/160 (50.62%), Query Frame = 2
Query:  263 LVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTS---ASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSGISDFSPA 733
            LVS      +GFF    S   YLG+WY + ++ +            VWVANR+NP+    G+L I +   NL +L +    +  T+       S   A LL  GN VL + N +      LWQSFDYPTDTLLP MKLG +L+TG   FL S  S   P+
Sbjct:   48 LVSPGNVLELGFFRTPSSSRWYLGMWYKKLSERTY-----------VWVANRDNPLSCSIGTLKISNM--NLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRDSNKN-DRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPS 193          
BLAST of EY664849 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17
Identity = 61/161 (37.89%), Postives = 83/161 (51.55%), Query Frame = 2
Query:  263 LVSAFGYFRMGFFSPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGNTS----ASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQTGHQWFLQSGISDFSPA 733
            LVS    F +GFF  + S   YLG+WY + +D +            VWVANR+NP+    G+L I    GN     +  N  V ++    GN      A +L  GN V+ + N++ +    LWQSFD+PTDTLLP MKL  +L+TG   FL S  S   P+
Sbjct:   46 LVSPGNVFELGFFRTNSSSRWYLGIWYKKVSDRTY-----------VWVANRDNPLSSSIGTLKIS---GNNPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRDSNNNDASGF-LWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPS 191          
BLAST of EY664849 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.228e-16
Identity = 56/147 (38.10%), Postives = 79/147 (53.74%), Query Frame = 2
Query:  263 LVSAFGYFRMGFF------SPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGN--TSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINL 679
            LVS    F +GFF      SPDG++  YLG+WY   +    +          VWVANR+N + +  G+L I  +  +L +L +   P+  T+     +   +A LL  GN VL +  ++  +R  +WQSFDYP DTLLP MKLG NL
Sbjct:   46 LVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTY----------VWVANRDNALHNSMGTLKI--SHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTNDLDRF-MWQSFDYPVDTLLPEMKLGRNL 179          
BLAST of EY664849 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16
Identity = 60/166 (36.14%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  263 LVSAFGYFRMGFF------SPDGSENRYLGVWYYRPTDPSVFDYYNSERNKPVWVANRNNPILDKSGSLTIDSTDGNLKILHNGGNPIVITSVKADGN--TSASLLKTGNLVLYEMNSDGSERRELWQSFDYPTDTLLPGMKLGINLQ-TGHQWFLQSGISDFSPA 733
            LVS    F +GFF      SPDG++  YLG+WY   +    +          VWVANR+N + +  G+L I  +  +L +L +   P+  T+     +   +A LL  GN VL +  +   +R  +WQSFDYP DTLLP MKLG N   +G++  L S  S   P+
Sbjct:   46 LVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTY----------VWVANRDNALHNSMGTLKI--SHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTTALDRF-MWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPS 198          
The following BLAST results are available for this feature:
BLAST of EY664849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SLSG3_BRAOL8.217e-2141.25S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
SLSG6_BRAOL4.078e-2041.98S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SRK6_BRAOE5.326e-2041.61Putative serine/threonine-protein kinase receptor ... [more]
SLSG2_BRAOA8.504e-1838.75S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
SLSG4_BRAOL1.111e-1737.89S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
SLSG0_BRAOA1.228e-1638.10S-locus-specific glycoprotein OS=Brassica oleracea... [more]
SLSG1_BRAOA1.604e-1636.14S-locus-specific glycoprotein BS29-1 OS=Brassica o... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-B09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664849 ID=EY664849; Name=EY664849; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGCAAGCAGAAAAGTAAAGCTTAACTTCCTTGAGGTCAACA
GTCAATGCTGTGGGCTGATTCCTATCACCCCTCTACATCTATCCAGTCCT
GGCTCCCTCATTTCTGCAAAGTACACACACAGTTTACTAATGGCTATCGA
ACGAAGAATTGACCTCCTTTTTAGCTTTTCATTCTTTGTTCTCTTGATGC
GGCCTTGTTGTTCCCAGACTGACAAATTACTCCGAGGCCAACATCTCAAA
GATGGAGACGAGTTGGTTTCAGCTTTTGGCTATTTCAGGATGGGATTCTT
TAGCCCTGACGGCTCGGAAAACCGGTACTTAGGAGTATGGTACTACAGGC
CTACAGATCCATCAGTTTTTGACTATTACAACAGTGAAAGAAATAAGCCA
GTGTGGGTTGCCAACAGAAACAACCCCATCTTAGATAAATCTGGAAGTCT
TACAATAGACAGCACTGATGGCAATTTGAAAATTTTACACAACGGTGGAA
ATCCTATTGTAATAACCTCTGTAAAAGCAGACGGTAACACAAGCGCTAGT
CTTTTGAAAACTGGCAATCTGGTGTTGTATGAGATGAATTCAGATGGATC
TGAAAGGCGAGAGCTGTGGCAAAGCTTTGACTATCCGACTGATACACTTC
TTCCGGGAATGAAACTGGGTATTAACTTGCAAACTGGGCACCAATGGTTT
CTCCAATCTGGGATTTCTGACTTCTCCCCTGCTCAAGTTCCTATACCTTA
NGTATCGACCCTAATGTCCCAAACAGTTGATCATCTGGTGGCGAAGAGAC
GTCTATTGGACTANCGAGATTTGGCGAAAGGGTGGNTTCATTNCTATANT
TTGGTTNNGGATGGGTACACTTNNGGCTCACGTAAAGCGAACATGAAAAT
ATTTCATTATTCTGGAAAGAAA
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