EY664826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.685e-56 Identity = 115/217 (53.00%), Postives = 151/217 (69.59%), Query Frame = 3 Query: 243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVDLDIAGDADGSRTPSDD---PSQGTIRSSPKMISLWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQSENYDEDEFYPGXXXXXXXXXXXXXXXXVVPLGSLPCD 884 +KNGVY++LV+DVR+AFE SSLVKV+C G+ SDYKK+GAKLKELVPCVLLSFDDEQILMWRG++WKS + + P + + + + D S PS++ + T SSPKMISLW+RA+ES+KA++L+E++LGPDDLLKKVEE EG S AAEH+Y A+VLS DGA+ + +D S+ D D+ + V P+GSLP D Sbjct: 343 SKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNPLIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSDIDDDF------DDECSDDESLDPVGPVGSLPVD 553
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.670e-45 Identity = 112/237 (47.26%), Postives = 147/237 (62.03%), Query Frame = 3 Query: 243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSRTPSDDPSQGTIRS--SPKMISLWKRAIESTKALVLDEI---NLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY------------EDG--SQSENYDEDEFYPGXXXXXXXXXXXXXXXXVVPLGSLPCD 884 AKNG+Y+TLV+DVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFDDEQILM RGK+WKS Y +P + V +L + + S SD +Q IR PKM LWK A++S+ AL+LD+ NL PD LL VEEF SQA EHS+PAL+++ D ++ S+ AEY E+G QS + +DE + VPLGSLP D Sbjct: 374 AKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILMHRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIREVLRPKMFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDASTDSLSAEYMNDEPETSVAGNEEGQLEQSPDLRDDEHF--------DVDMFERLESSVPLGSLPID 602
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.548e-43 Identity = 98/229 (42.79%), Postives = 141/229 (61.57%), Query Frame = 3 Query: 243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSRTPSDDPSQGTIRS--SPKMISLWKRAIESTKALVLDEIN---LGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEYEDGS------QSENYDEDEFYPGXXXXXXXXXXXXXXXXVVPLGSLPCD 884 AKNG+Y+ LVRDVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFD+EQILM+RGK+WKS YP+P + + ++ ++ D S +DD + +R PKM LW AIES+ AL+LD+ L PD LL +VE+F SQ EHS+PA++++ ++ + AEY + + + ++ E VPLG+LP D Sbjct: 370 AKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILMFRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTNAIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVANDESNPDVLNAEYTEDEPETGTLEPQQHEFTESSDVAEDDHFEDDMLKRLESSVPLGALPID 598
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 7.550e-22 Identity = 52/114 (45.61%), Postives = 78/114 (68.42%), Query Frame = 3 Query: 246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPP---SFSNPVDLDIAGDADGSRTPSDDPSQGTIRSSPKMISL 578 KNGVY LV++V+ AFE LV+++C+GM SD++K+GAKLK+LVPCVL+SF++EQIL+WRG++WKS P +++D A D + S + SQ T+ +P + S+ Sbjct: 384 KNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTALPEDDEPSVSPNQSQ-TMTQNPPLDSM 496
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0495900 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.391e-21 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYP 455 KNGVYL LV+ VR AFE LV+V+C G++ SD +K+GAKLK+LVPC LLSF+ E ILMWRG DWKS P Sbjct: 326 KNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLP 395
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.860e-20 Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 3 Query: 246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYP 455 KNGVY LV VR AFE LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILMWRG DWKS P Sbjct: 326 KNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLP 395
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.064e-18 Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWK--SMYPEPPSF---SNPVDLDIAGDADGSRTPSDDPSQGT 548 AKNG Y +LV VR+AF S LV+++C G+ DYKK+GAKL++LVPC+L++FD EQ+++WRGKD+K E SF + +D D+ D SR D P + T Sbjct: 301 AKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDV--DLSCSRGAQDSPDETT 405
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.740e-16 Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 3 Query: 243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDW 440 AKNG Y +LV VR+AF LV+++ KG+ SDY+K+G KL++LVPC+++SFD EQI++WRGKD+ Sbjct: 299 AKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDY 364
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.093e-12 Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = 3 Query: 246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGK 434 +NGVY+ +V VR AF+ +V+++C + +SD KK+G KL++LVPCV L F DEQI++WRGK Sbjct: 288 RNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.864e-12 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 3 Query: 246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGK 434 +NGVY+ +V VR FE +V+++C + SD K++G KLKE+VPCV + F DEQI++WRGK Sbjct: 286 RNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348 The following BLAST results are available for this feature:
BLAST of EY664826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664826 ID=EY664826; Name=EY664826; organism=Citrus sinensis; type=EST; length=934bpback to top |