EH117797

Overview
NameEH117797
Unique NameEH117797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length184
Libraries
Library NameType
Different expression profile of FJWC and FJ72-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9236 contig Csv1_Contig9236:247..430. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH117797 vs. ExPASy Swiss-Prot
Match: PPA18_ARATH (Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.338e-20
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = -2
Query:   13 NDGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVN 168
            N+GK DPCG V+ITIGDGGN+EGLARKYK+P P+WSVFREASFGHGEL++VN
Sbjct:  339 NNGKSDPCGPVHITIGDGGNREGLARKYKDPSPEWSVFREASFGHGELQMVN 390          
BLAST of EH117797 vs. ExPASy Swiss-Prot
Match: PPA21_ARATH (Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.584e-13
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = -2
Query:   13 KPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVN 159
            K DPCG +YITIGDGGN+EGLA ++K PQ   S FRE+SFGHG L+I++
Sbjct:  347 KADPCGPMYITIGDGGNREGLALRFKKPQSPLSEFRESSFGHGRLRIID 395          
BLAST of EH117797 vs. ExPASy Swiss-Prot
Match: PPA20_ARATH (Probable inactive purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.529e-13
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = -2
Query:   13 KPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVN 159
            K D CG VYI IGDGGN EGLA KY++P P+ S+FREASFGHG+L + N
Sbjct:  344 KFDKCGPVYINIGDGGNLEGLATKYRDPNPEISLFREASFGHGQLVVEN 392          
BLAST of EH117797 vs. ExPASy Swiss-Prot
Match: PPA22_ARATH (Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.287e-12
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = -2
Query:   13 DGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVN 165
            + K DPCG ++ITIGDGGN+EGLA  +K P    S FRE+SFGHG LK+++
Sbjct:  341 NNKADPCGPIHITIGDGGNREGLALSFKKPPSPLSEFRESSFGHGRLKVMD 391          
BLAST of EH117797 vs. ExPASy Swiss-Prot
Match: PPA26_ARATH (Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.691e-12
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = -2
Query:   13 PDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVN 156
            PD    VYIT+GDGGN+EGLA ++  PQPD+S FREAS+GH  L I N
Sbjct:  375 PDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTLDIKN 422          
BLAST of EH117797 vs. ExPASy Swiss-Prot
Match: PPA25_ARATH (Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.358e-11
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = -2
Query:   13 DPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVN 153
            DP   +YITIGDGGN EG+A  + +PQP +S +REASFGH  L+I N
Sbjct:  378 DPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLEIYN 424          
BLAST of EH117797 vs. ExPASy Swiss-Prot
Match: PPA6_ARATH (Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.610e-11
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = -2
Query:   13 DPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVN 153
            DP   +YITIGDGGN EG+A  + +PQP +S +REASFGH  L+I+N
Sbjct:  378 DPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFGHAVLEIMN 424          
The following BLAST results are available for this feature:
BLAST of EH117797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PPA18_ARATH1.338e-2080.77Purple acid phosphatase 18 OS=Arabidopsis thaliana... [more]
PPA21_ARATH1.584e-1365.31Purple acid phosphatase 21 OS=Arabidopsis thaliana... [more]
PPA20_ARATH3.529e-1367.35Probable inactive purple acid phosphatase 20 OS=Ar... [more]
PPA22_ARATH2.287e-1258.82Purple acid phosphatase 22 OS=Arabidopsis thaliana... [more]
PPA26_ARATH8.691e-1262.50Bifunctional purple acid phosphatase 26 OS=Arabido... [more]
PPA25_ARATH7.358e-1159.57Purple acid phosphatase 25 OS=Arabidopsis thaliana... [more]
PPA6_ARATH9.610e-1159.57Purple acid phosphatase 6 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionfjfw31 Different expression profile of FJWC and FJ72-1 Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH117797 ID=EH117797; Name=EH117797; organism=Citrus sinensis; type=EST; length=184bp
GACTGCGTACCAATTCACTATCTTGAGCTCCCCATGACCAAAGCTTGCTT
CACGGAATACTGACCAGTCAGGCTGTGGGTTTTTGTACTTGCGTGCTAAA
CCTTCTTTGTTCCCTCCATCTCCAATAGTTATGTAGACCGCACCACAAGG
ATCTGGTTTTCCATCGTTACTCAGGACTCATCGT
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