EY664800

Overview
NameEY664800
Unique NameEY664800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664800 vs. ExPASy Swiss-Prot
Match: Y1934_ARATH (Uncharacterized protein At1g09340, chloroplastic OS=Arabidopsis thaliana GN=At1g09340 PE=1 SV=1)

HSP 1 Score: 412.149 bits (1058), Expect = 2.163e-114
Identity = 208/300 (69.33%), Postives = 241/300 (80.33%), Query Frame = 2
Query:   11 MASTVVVQHQTQPXXXXXXXXXXXXNGTRIHSQIQYRRKVLQPKVGLQITASSEKNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSMHKGKLNTESVLESKGVNWTSLMPVYIYGPLNYNPVEEWFXHRLKACRPIPIPSXXIQVTQLGHVKDXARPLXXVLGMKKPAAGI-HISGDIMSPLMGXPGMC-KAAGISXPDL 904
            MA  +++Q Q QP            NG ++H Q+QY+RKV QPK  L ++ASSEK ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKDYDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE D VDPKS HKGKL TES+L+SKGVNWTS+ PVYIYGPLNYNPVEEWF HRLKA RPIP+P+  IQ++QLGHVKD A     VLG +K +  I +ISG+      G    C KA G   P++
Sbjct:    1 MAKMMMLQ-QHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEI 299          
BLAST of EY664800 vs. ExPASy Swiss-Prot
Match: Y3314_ARATH (Uncharacterized protein At3g63140, chloroplastic OS=Arabidopsis thaliana GN=At3g63140 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 76/253 (30.04%), Postives = 122/253 (48.22%), Query Frame = 2
Query:  158 TASSEKNILIM----GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSMHKGKLNTESVLESKGVNWTSLMPVYIYGPLNYNPVEEWFXHRLKACRPIPIPSXXIQVTQLGHVKDXARPLXXVLGMKKPAAG--IHISGDIMSPLMGXPGMCKAA 883
            +   +KN+LI+    GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S      G +  +     V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH E D V   + H   +  E  L     NW S  P Y+ G  N    EEWF  R+   R +PIP   +Q+T + HV+D +  L   +   + A+G   +   D    L G   +C AA
Sbjct:   75 SVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSG-----GGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAA 318          
The following BLAST results are available for this feature:
BLAST of EY664800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1934_ARATH2.163e-11469.33Uncharacterized protein At1g09340, chloroplastic O... [more]
Y3314_ARATH1.139e-2230.04Uncharacterized protein At3g63140, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664800 ID=EY664800; Name=EY664800; organism=Citrus sinensis; type=EST; length=914bp
AGCATCAACCATGGCAAGCACGGTGGTTGTGCAGCACCAAACACAGCCTT
CTTTCTCCACCCTCACTTCGTCTCTTTCTGACTTCAATGGCACTAGAATC
CACTCTCAAATTCAGTATAGGAGAAAGGTGTTGCAGCCAAAAGTAGGGCT
GCAAATTACAGCTTCTAGTGAAAAGAACATTCTTATAATGGGAGGAACTC
GATTCATTGGTGTATTTCTTTCAAGACTCCTAGTCAAAGAGGGTCATCAG
GTGACCTTGTTTACTAGGGGAAAGGCACCAATCGCCCAACAATTGCCCGG
TGAATCAGACCAGGAATTCGCCGAATTTTCTTCCAAGATCTTGCATTTGA
AAGGAGACAGAAAGGACTATGATTTTGTGAAATCCAGTCTCTCTGCCAAA
GGCTTTGATGTTGTTTATGATATAAATGGACGAGAGGCAGATGAAGTCGA
ACCCATATTGGATGCACTGCCAAATCTAGAACAGTTCATCTACTGCTCCT
CAGCTGGTGTTTATCTAAAATCTGACCTTTTACCACACTGTGAGACCGAC
ACTGTTGATCCAAAGAGCATGCACAAGGGAAAGCTTAATACAGAGTCCGT
ACTGGAATCAAAAGGCGTGAACTGGACTTCTTTAATGCCAGTCTATATAT
ATGGTCCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTNCACCGTTTG
AAAGCATGTCGNCCAATTCCAATCCCCAGCTNCNGAATACAAGTAACCCA
GCTTGGTCATGTAAAGGACTNGGCTAGGCCCCTTGNTCANGTTCTTGGTA
TGAAAAAGCCAGCAGCAGGTATTCACATCTCAGGAGATATTATGTCACCT
TTGATGGGATANCCAGGCATGTGCAAAGCTGCTGGNATTTCGNAGCCTGA
TCTGTGCCTACACC
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