EH117794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.665e-32 Identity = 63/90 (70.00%), Postives = 76/90 (84.44%), Query Frame = -2 Query: 13 NITNPCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVVN 282 N +NPCR APTA+TFHKCKN++V++L V++SQQMHIA T+C RV IS L+VIAPA SPNTDGIHIS SRG+ + N+ V TGDDCISIV N Sbjct: 168 NHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKN 257
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.199e-24 Identity = 50/88 (56.82%), Postives = 69/88 (78.41%), Query Frame = -2 Query: 19 NITNPCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIV 282 N + PCR APTA+TF CKNLKV +L+ N+QQ+HI F +C VV SNL + A A+SPNTDG+H+S ++ +++ ++I+GTGDDCISIV Sbjct: 189 NKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIV 276
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.015e-23 Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = -2 Query: 22 PCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 270 PC+ APTA+TF CKNL V L + +SQ+MH++F C V+ SNL V AP SPNTDGIHI+ ++ + V NS++GTGDDCISI Sbjct: 201 PCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISI 283
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.326e-23 Identity = 45/89 (50.56%), Postives = 69/89 (77.53%), Query Frame = -2 Query: 19 SNITNPCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIV 285 +N PC+ APTA+TF+K K++ V++L++ N+QQ+H++F NC+ V SNL V AP SPNTDGIH++ ++ + + + ++GTGDDCISIV Sbjct: 201 TNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIV 289
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.579e-23 Identity = 47/84 (55.95%), Postives = 65/84 (77.38%), Query Frame = -2 Query: 19 PCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIV 270 PC APTA+TF +C NL+V ++R+ N+QQMH+ F +C V NL V +PA+SPNTDGIH+S ++ + +++SIV TGDDCISIV Sbjct: 188 PCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIV 271
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.914e-22 Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = -2 Query: 22 TNPCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 276 + PC APTA+T + KNL V++LRV N+QQ+ I+ C +V +SN+E+ AP +SPNTDGIHI+ ++ + V NS +GTGDDCISI Sbjct: 185 SKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISI 269
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR_MALDO (Polygalacturonase OS=Malus domestica PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.569e-22 Identity = 44/85 (51.76%), Postives = 66/85 (77.65%), Query Frame = -2 Query: 19 PC-RHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIV 270 PC +APTA+TF++C NL V++L + ++QQ+H+ F NC+ V S L V AP +SPNTDGIH++ ++ + + +S++GTGDDCISIV Sbjct: 214 PCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIV 298
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 9.499e-22 Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = -2 Query: 22 NITNPCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 282 N PC APTA+TF+ K+L V++L+V N+QQ+ I+ C V +SN+ V APA+SPNTDGIHI+ ++ + V SI+GTGDDCISI Sbjct: 183 NKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISI 269
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.045e-17 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = -2 Query: 22 SNITNPCRHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 285 S+ + PC +PT I F N++V+ LR+ NS Q H+ F C V+I+ +++ +P SPNTDGIH+ +R V + NS+V GDDCISI Sbjct: 201 SSSSGPCA-SPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISI 287
BLAST of EH117794 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.612e-15 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = -2 Query: 22 RHAPTAITFHKCKNLKVQSLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 264 R PTAI F L +Q L+++NS + H+ F NC V I + + AP +SPNTDGI I AS+ ++ + +GTGDDC++I Sbjct: 180 RDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAI 260 The following BLAST results are available for this feature:
BLAST of EH117794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >EH117794 ID=EH117794; Name=EH117794; organism=Citrus sinensis; type=EST; length=298bpback to top |