CX077916

Overview
NameCX077916
Unique NameCX077916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4595 contig Csv1_Contig4595:1..586. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077916 vs. ExPASy Swiss-Prot
Match: ACOX2_ARATH (Acyl-coenzyme A oxidase 2, peroxisomal OS=Arabidopsis thaliana GN=ACX2 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.232e-40
Identity = 76/92 (82.61%), Postives = 85/92 (92.39%), Query Frame = -1
Query:  224 CPDPSSRAVLKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDFPDYVTRAPIARQSDAYAYYTQIVGF 499
            CPDPS++A LKL CDLYAL+RIW DIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRN+A EL+DAF+ PD+VTRAPIA QSDAY+ YTQ+VGF
Sbjct:  601 CPDPSAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNVAKELVDAFELPDHVTRAPIAMQSDAYSQYTQVVGF 692          
BLAST of CX077916 vs. ExPASy Swiss-Prot
Match: ACOX2_CUCMA (Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita maxima GN=Acx PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.354e-38
Identity = 73/92 (79.35%), Postives = 84/92 (91.30%), Query Frame = -1
Query:  224 CPDPSSRAVLKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDFPDYVTRAPIARQSDAYAYYTQIVGF 499
            CP+ +++A LKLVCDLYAL+RIWNDIGTYRNVDYVAPNKAKAIHKLTEYL FQVRNIA EL+DAFD PD+VTRAPIA +S+AY+ YTQ +GF
Sbjct:  599 CPNANTQATLKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLCFQVRNIAQELVDAFDLPDHVTRAPIAMKSNAYSQYTQYIGF 690          
The following BLAST results are available for this feature:
BLAST of CX077916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ACOX2_ARATH1.232e-4082.61Acyl-coenzyme A oxidase 2, peroxisomal OS=Arabidop... [more]
ACOX2_CUCMA3.354e-3879.35Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_5G10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-5G10-M19-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077916 ID=CX077916; Name=CX077916; organism=Citrus sinensis; type=EST; length=586bp
TTTTTTTTTTTTTTTTTGGAGCAAGCACTATGTAGTTTCTCTTATTAACA
AAGTGATGATGGATCAATCAATATCGCTAGAAAATATTTAAAGGTTTCCT
GAATTTTCACAACTTATTCATGTATGCAAAGATAAAGAAAAAAAAAAATT
CTCCCTGTTTTTACATCCGCACTTGTTTTCAACAGTATCCAAATCACTGC
TTTTGCTTCCTCTAGGAATATCAAAATCCAACAATCTGTGTGTAATAAGC
ATAAGCATCCGATTGCCTAGCAATTGGTGCCCTTGTAACATAGTCTGGAA
AATCAAATGCATCTATAAGTTCACCAGCAATATTCCTCACTTGGAAACTC
AAGTATTCTGTGAGCTTGTGAATTGCCTTTGCCTTGTTAGGGGCCACATA
GTCAACATTACGGTATGTTCCAATGTCATTCCAGATTCGGTTCAAGGCAT
AAAGATCACAGACCAGTTTCAGAACAGCTCGAGAGCTAGGATCAGGGCAG
CTGGAGAATATATGATGGCTAGATTAAAAAATCAGAATCATAACGCAAAA
AGAAAAGAACTTATGACCTTGAAACTAGGAAGTCCT
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