EY664778

Overview
NameEY664778
Unique NameEY664778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664778_ssr276 microsatellite EY664778_ssr276:276..299. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY664778 vs. ExPASy Swiss-Prot
Match: PCP_HUMAN (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.280e-13
Identity = 37/64 (57.81%), Postives = 50/64 (78.12%), Query Frame = -3 
Query:  378 QHRYYXDSMPFGSFDEAFRDANNLGYISSTQALADCAQLITDVKRNL-SAENCPVIAIGGSYGG 566
            +HRYY +S+PFG  D +F+D+ +L +++S QALAD A+LI  +KR +  AEN PVIAIGGSYGG
Sbjct:  121 EHRYYGESLPFG--DNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGG 182
[Close]
BLAST of EY664778 vs. ExPASy Swiss-Prot
Match: PCP_PONAB (Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = -3 
Query:  378 QHRYYXDSMPFGSFDEAFRDANNLGYISSTQALADCAQLITDVKRNL-SAENCPVIAIGGSYGG 566
            +HRYY +S+PFG  D  F+D+ +L +++S QALAD A+LI  +KR +  AEN PVIAIGGSYGG
Sbjct:  121 EHRYYGESLPFG--DNTFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGG 182
The following BLAST results are available for this feature:
BLAST of EY664778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PCP_HUMAN8.280e-1357.81Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
PCP_PONAB1.081e-1257.81Lysosomal Pro-X carboxypeptidase OS=Pongo abelii G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664778 ID=EY664778; Name=EY664778; organism=Citrus sinensis; type=EST; length=928bp
ATATTTGTCTTTAATTGAAAACCGAAATTCGATGATACGCATTCCGAAAT
CTAAAAATTACAGCATTGACTTGTTGGTTTTGTTGCAAAATTTGGTTAAG
TTGTTTTAATTTCTTACTCTGAAATCGTTGGTGACAACAACATGGTATCC
GTTTTGTGGTGTGAGGTCATCAAAGTAAAGGATTGGTGCCGATGATGCCA
ATGCTCCGGTAGCAATATGAGGGTATTTCAGCCGTAACCATGACGCAAGC
ACTGGAATTTACGCCCAAAAAAAGAAATAATAATAATAATAATAATAATG
ATAATGATATGACCGATATGAAAATTTTAAGCAATTTAATCATACTGGCA
ATATCTTTGTATTGTGTGTTACTTACTTCCACCATAAGATCCTCCTATAG
CAATAACGGGACAATTTTCAGCTGACAGGTTCCTTTTAACATCTGTGATC
AACTGTGCACAATCTGCCAAAGCTTGTGTTGAGCTTATATATCCAAGATT
ATTTGCATCTCGGAATGCTTCATCAAATGATCCAAAGGGCATTGAGTCTN
CATAGTAACGATGCTGTATACNGTACCAAGTTATTTAATCATTATCCATT
TTGCCACCAATTCAAGTCTCCAGGACAAAGCTATTTTTATTTTGGGTTTT
TTCAATGCTTCCAAATTCAGAAAGTACACAGATTTGATTTGTTATTAAGC
GGAGACACATTTTTGTGACTCTGAGGATAAGTGGGAAAACTATTAAACTA
AGCCCGTTTTATTTTACTTCGGCTTCATGTTAAGAACATTAATTGTCTAT
TAAAAAAAAAAAAAAAAGTGGCGGCGCTTTAGAGATCCATACTACTTCCC
GTGCATGGAACTTATATCTTTTCTTTGGGAACTAATTCATTTATTGGGCG
TGTTTTACACGTCTGACTGGGAAACCCG
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