EG358378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EG358378 vs. ExPASy Swiss-Prot
Match: RD23C_ARATH (Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana GN=RAD23-3 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.784e-28 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 3 Query: 3 GQAASNLVAGSNLEATVQQILDMGGGSWDRETVIRALRAAYNNPERAVEYLYSGIPEQTAVPPVARASA-GGQAGXPP 233 GQAASNL AGSNLE+T+QQILDMGGG+WDRETV+ ALRAA+NNPERAVEYLY+GIPEQ VPPVAR A GQ PP Sbjct: 175 GQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVARPPASAGQPANPP 252
BLAST of EG358378 vs. ExPASy Swiss-Prot
Match: RD23D_ARATH (Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana GN=RAD23-4 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 3.043e-28 Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 3 Query: 3 GQAASNLVAGSNLEATVQQILDMGGGSWDRETVIRALRAAYNNPERAVEYLYSGIPEQTAVPPVARASAGGQAGXPP 233 GQAASNLVAG+ LE+TVQQILDMGGGSWDR+TV+RALRAA+NNPERAVEYLYSGIP Q +PPVA+A A G+ P Sbjct: 136 GQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANP 212
BLAST of EG358378 vs. ExPASy Swiss-Prot
Match: RD23A_ARATH (Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 2.495e-22 Identity = 52/77 (67.53%), Postives = 59/77 (76.62%), Query Frame = 3 Query: 3 GQAASNLVAGSNLEATVQQILDMGGGSWDRETVIRALRAAYNNPERAVEYLYSGIPEQTAVP-PVARASAGGQAGXP 230 GQAAS LV+GS+LE VQQI++MGGGSWD+ETV RALRAAYNNPERAV+YLYSGIP+ V PV A G P Sbjct: 136 GQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSGAAP 212
BLAST of EG358378 vs. ExPASy Swiss-Prot
Match: RD23B_ARATH (Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana GN=RAD23-2 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 3.259e-22 Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = 3 Query: 3 GQAASNLVAGSNLEATVQQILDMGGGSWDRETVIRALRAAYNNPERAVEYLYSGIPEQTAVPP--VARASAGGQAGXPP 233 GQAAS LV+GS++E VQQI++MGGGSWD+ETV RALRAAYNNPERAV+YLYSGIPE +P ++ +G + PP Sbjct: 134 GQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETVTIPATNLSGVGSGRELTAPP 212
BLAST of EG358378 vs. ExPASy Swiss-Prot
Match: RAD23_ORYSJ (Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 7.260e-22 Identity = 47/62 (75.81%), Postives = 54/62 (87.10%), Query Frame = 3 Query: 3 GQAASNLVAGSNLEATVQQILDMGGGSWDRETVIRALRAAYNNPERAVEYLYSGIPEQTAVP 188 GQA SNLVAGSNLEAT+Q IL+MGGG WDR+ V+ AL AA+NNPERAVEYLYSG+PEQ +P Sbjct: 146 GQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIP 207 The following BLAST results are available for this feature:
BLAST of EG358378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EG358378 ID=EG358378; Name=EG358378; organism=Citrus sinensis; type=EST; length=236bpback to top |