EY664739

Overview
NameEY664739
Unique NameEY664739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMP1D_ARATH (Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.116e-85
Identity = 89/129 (68.99%), Postives = 102/129 (79.07%), Query Frame = 1
Query:  130 LQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDVEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVK 516
            LQPRL+SSF+GN  I STQPL  LF ++ G+  VSMQLSRTFSGL DLLFNRRN D   + +RKRLRPG VSP RPVP HI +PPYV+S +  GI SG EVHD+KGIECMR SG LAA+V +YAGTLVK
Sbjct:    7 LQPRLISSFLGNNSIRSTQPLIHLFRFDLGRRHVSMQLSRTFSGLTDLLFNRRNEDEVIDGKRKRLRPGNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAARVRDYAGTLVK 135          

HSP 2 Score: 164.851 bits (416), Expect = 1.116e-85
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 3
Query:  516 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            G+TTDEID+AVH MII+NGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR LEDGD INIDVTVYLNGYHGDTS TFFCG+V
Sbjct:  137 GVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFFCGNV 218          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMP1B_ARATH (Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 5.619e-51
Identity = 68/81 (83.95%), Postives = 75/81 (92.59%), Query Frame = 3
Query:  519 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            +TT+EIDKAVH MII+ GAYPSPLGYGGFPKSVCTSVNEC+CHGIPDSR L+ GD INIDVTVYL+GYHGDTS TFFCG+V
Sbjct:  157 VTTNEIDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSRTFFCGEV 237          

HSP 2 Score: 70.0922 bits (170), Expect = 5.619e-51
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 1
Query:  244 SRTFSGLADLLFNRRNLDVEPN---RRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVK 516
            ++  SGL + +  R+  ++E     RR   LR G+VSP   VPDHIPRPPYV S     I S  ++   +GI  MR +  LAA+VL YAGTLVK
Sbjct:   61 AKKVSGLEEAIRIRKMRELETKSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVK 154          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMP1C_ARATH (Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.439e-45
Identity = 67/81 (82.72%), Postives = 74/81 (91.36%), Query Frame = 3
Query:  519 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            +TTDEIDKAVHQM+I+ GAYPSPLGYGGFPKSVCTSVNEC+ HGIPDSR L++GD INIDV VYL+GYHGDTS TF CGDV
Sbjct:  130 VTTDEIDKAVHQMVIEFGAYPSPLGYGGFPKSVCTSVNECMFHGIPDSRPLQNGDIINIDVAVYLDGYHGDTSKTFLCGDV 210          

HSP 2 Score: 55.4546 bits (132), Expect = 1.439e-45
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 1
Query:  334 GKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVK 516
            G VSP   VPDHI +P YV S K   I S  ++ D  GI  M+ +  LAA+VL+YAGTLV+
Sbjct:   67 GTVSPRLSVPDHILKPLYVESSKVPEISSELQIPDSIGIVKMKKACELAARVLDYAGTLVR 127          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMP1D_DICDI (Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=map1d PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.361e-41
Identity = 60/82 (73.17%), Postives = 67/82 (81.71%), Query Frame = 3
Query:  516 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            GITTDEIDK VHQ IID GAYPSPLGY GFPKS+CTS+NE +CHGIPD R LE GD + IDVT+Y NGYHGDT  TF  G++
Sbjct:  189 GITTDEIDKLVHQNIIDRGAYPSPLGYKGFPKSICTSINEVLCHGIPDDRPLEFGDIVKIDVTLYYNGYHGDTCATFPVGEI 270          

HSP 2 Score: 55.8398 bits (133), Expect = 3.361e-41
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 1
Query:  325 LRPGKVSPHRPVPDHIPRPPYVNSQKPIGI-VSGP-EVHDEKGIECMRVSGRLAAQVLEYAGTLVK 516
            +R G VSP   +P HI +P YV  +  I   +  P E+H  + IE MRV G++A +VLEYAGTLV+
Sbjct:  122 IRGGIVSPQPLIPAHIKKPKYVLGEPVIDFEIDDPIEIHTAESIEHMRVVGKMAKEVLEYAGTLVR 187          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMP1D_DANRE (Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=map1d PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.600e-37
Identity = 61/82 (74.39%), Postives = 65/82 (79.27%), Query Frame = 3
Query:  516 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            G+TTDEID  VHQ  I +  YPSPL YGGFPKSVCTSVN  +CHGIPDSR L+DGD INIDVTVYL GYHGDTS TF  G V
Sbjct:  121 GMTTDEIDFIVHQEAIRHNGYPSPLHYGGFPKSVCTSVNNVVCHGIPDSRPLQDGDIINIDVTVYLEGYHGDTSETFLIGSV 202          

HSP 2 Score: 46.595 bits (109), Expect = 1.600e-37
Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 1
Query:  277 FNRRNLDVEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKV 519
            F+R     +P      +RP  V P  PVP HI RP YV+S K        E+ DE+ I+ +R + +LA  +L   G  +KV
Sbjct:   40 FHRSFFWRKPKTSHSVVRPAIVRPAYPVPKHIQRPDYVSSSKVPEWPDYIEIKDEEQIQGLRRACQLARHILLLTGNSLKV 120          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMPM_MYCTU (Methionine aminopeptidase OS=Mycobacterium tuberculosis GN=map PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.843e-37
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 3
Query:  516 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            G+TTDE+D+  H+ ++DNGAYPS LGY GFPKS CTS+NE ICHGIPDS  + DGD +NIDVT Y+ G HGDT+ TF  GDV
Sbjct:   71 GVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDV 152          

HSP 2 Score: 48.521 bits (114), Expect = 7.843e-37
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 1
Query:  316 RKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIV-SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLV 513
            R  L PG +SP RPVP+ I RP YV   KP     S P V   + IE MRV+GR+AA  L  AG  V
Sbjct:    4 RTALSPGVLSPTRPVPNWIARPEYVG--KPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAV 68          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMPM_MYCBO (Methionine aminopeptidase OS=Mycobacterium bovis GN=map PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.843e-37
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 3
Query:  516 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            G+TTDE+D+  H+ ++DNGAYPS LGY GFPKS CTS+NE ICHGIPDS  + DGD +NIDVT Y+ G HGDT+ TF  GDV
Sbjct:   71 GVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDV 152          

HSP 2 Score: 48.521 bits (114), Expect = 7.843e-37
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 1
Query:  316 RKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIV-SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLV 513
            R  L PG +SP RPVP+ I RP YV   KP     S P V   + IE MRV+GR+AA  L  AG  V
Sbjct:    4 RTALSPGVLSPTRPVPNWIARPEYVG--KPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAV 68          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMPM1_XENTR (Methionine aminopeptidase 1 OS=Xenopus tropicalis GN=metap1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.795e-32
Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 3
Query:  516 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            GITT+EID AVH   I    YPSPL Y  FPKS CTSVNE ICHGIPD R L+DGD +N+D+TVY +GYHGD + TF+ GDV
Sbjct:  160 GITTEEIDHAVHLACISRNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQDGDIVNVDITVYRDGYHGDLNETFYVGDV 241          

HSP 2 Score: 38.891 bits (89), Expect = 1.795e-32
Identity = 31/85 (36.47%), Postives = 44/85 (51.76%), Query Frame = 1
Query:  289 NLDVEPNRRRK-RLRPG-KVSPHRPVPDHIPRPPYVN-------SQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVK 516
            N D  P  R   +LRP   ++P RPVP +I RP Y +       S++ +   S  ++   + IE MRV  RLA +VL  A  +VK
Sbjct:   74 NTDPWPGYRYTGKLRPHYPLTPMRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKILSTEDIEGMRVVCRLAREVLGVAAMMVK 158          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMPM1_XENLA (Methionine aminopeptidase 1 OS=Xenopus laevis GN=metap1 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.965e-32
Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 3
Query:  516 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            GITT+EID AVH   I    YPSPL Y  FPKS CTSVNE ICHGIPD R L+DGD +N+D+TVY +GYHGD + TF+ GDV
Sbjct:  160 GITTEEIDHAVHLACISRNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQDGDIVNVDITVYRDGYHGDLNETFYVGDV 241          

HSP 2 Score: 37.7354 bits (86), Expect = 3.965e-32
Identity = 31/85 (36.47%), Postives = 43/85 (50.59%), Query Frame = 1
Query:  289 NLDVEPNRRRK-RLRPG-KVSPHRPVPDHIPRPPYVN-------SQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVK 516
            N D  P  R   +LRP   ++P RPVP +I RP Y +       S++ +   S  +    + IE MRV  RLA +VL  A  +VK
Sbjct:   74 NTDPWPGYRYTGKLRPHYPLTPMRPVPSYIQRPDYADHPLGMSESEQTLKGTSQIKTLSPEDIEGMRVVCRLAREVLGVAAMMVK 158          
BLAST of EY664739 vs. ExPASy Swiss-Prot
Match: AMPM1_CHICK (Methionine aminopeptidase 1 OS=Gallus gallus GN=METAP1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.965e-32
Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 3
Query:  516 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSXTFFCGDV 761
            G+TT+EID AVH   I    YPSPL Y  FPKS CTSVNE ICHGIPD R L++GD +N+D+TVY NGYHGD + TF+ G+V
Sbjct:  160 GVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITVYRNGYHGDLNETFYVGEV 241          

HSP 2 Score: 40.0466 bits (92), Expect = 3.965e-32
Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 1
Query:  322 RLRPG-KVSPHRPVPDHIPRPPYVN-------SQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVK 516
            +LRP   ++P RPVP +I RP Y +       S++ +   S  ++   + IE MRV  RLA +VL+ A  +VK
Sbjct:   86 KLRPHYPLTPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKILSPEDIEGMRVVCRLAREVLDVAAMMVK 158          
The following BLAST results are available for this feature:
BLAST of EY664739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
AMP1D_ARATH1.116e-8568.99Methionine aminopeptidase 1D, chloroplastic/mitoch... [more]
AMP1B_ARATH5.619e-5183.95Methionine aminopeptidase 1B, chloroplastic OS=Ara... [more]
AMP1C_ARATH1.439e-4582.72Methionine aminopeptidase 1C, chloroplastic/mitoch... [more]
AMP1D_DICDI3.361e-4173.17Methionine aminopeptidase 1D, mitochondrial OS=Dic... [more]
AMP1D_DANRE1.600e-3774.39Methionine aminopeptidase 1D, mitochondrial OS=Dan... [more]
AMPM_MYCTU7.843e-3765.85Methionine aminopeptidase OS=Mycobacterium tubercu... [more]
AMPM_MYCBO7.843e-3765.85Methionine aminopeptidase OS=Mycobacterium bovis G... [more]
AMPM1_XENTR1.795e-3265.85Methionine aminopeptidase 1 OS=Xenopus tropicalis ... [more]
AMPM1_XENLA3.965e-3265.85Methionine aminopeptidase 1 OS=Xenopus laevis GN=m... [more]
AMPM1_CHICK3.965e-3263.41Methionine aminopeptidase 1 OS=Gallus gallus GN=ME... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664739 ID=EY664739; Name=EY664739; organism=Citrus sinensis; type=EST; length=891bp
TGAACAGATAACAAAACATAGGGAGGGGAAACAACAAGACAAGCTCAGCT
GCCTGAGAGTTGTATGTAATAAAACATTAAAAAGTTGAAAAGAAAAGAAA
GGATGGTAGGCGGCGCTTGCTCTCTGCAACTGCAGCCAAGACTACTTTCT
TCATTCGTGGGTAATCGCTTCATTCACTCAACTCAGCCTCTTAATCAACT
CTTTGGCTACAACTCAGGAAAGAATCAAGTTTCAATGCAATTATCTAGAA
CATTTTCTGGCTTAGCTGACCTCTTATTCAATAGGAGAAATCTAGACGTG
GAGCCGAACAGAAGACGTAAGAGACTAAGGCCTGGGAAGGTATCTCCGCA
TCGACCTGTTCCAGATCATATACCAAGGCCTCCCTATGTCAATTCTCAGA
AACCAATTGGAATTGTAAGTGGACCTGAAGTGCATGACGAGAAGGGGATA
GAGTGCATGAGAGTTTCAGGCAGATTGGCAGCACAGGTTCTTGAATATGC
TGGGACTTTAGTTAAGGTATTACAACAGATGAAATTGACAAAGCAGTTCA
TCAAATGATTATTGATAATGGAGCATATCCCTCACCTCTTGGCTATGGTG
GGTTTCCAAAGAGTGTCTGTACATCAGTGAATGAATGTATCTGCCACGGA
ATACCGGATTCCCGTGCACTTGAGGATGGTGATACTATAAATATTGATGT
GACTGTTTATCTAAATGGTTATCATGGTGATACATCANCGACTTTCTTTT
GTGGAGATGTGATGATGAAGCCAGAAATCTGGTGAAGGTACCAAAGATTG
TCTACATAAGCTATATCGTATGTGCACCGGGATGGAGTACAAGAAATGGC
AAACCATTCAGACATGCAGATGATTTATATGGGCGTGTCGA
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