EG358372

Overview
NameEG358372
Unique NameEG358372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length388
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2888 contig Csv1_Contig2888:710..1097. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.358e-28
Identity = 70/112 (62.50%), Postives = 84/112 (75.00%), Query Frame = 1
Query:   76 NSAQSKDPREVKSKKQKKGNVNDAKK-EEKENS-PKA------DSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            +S +    R+ KSK+     V+ +K+ EEKE+S PK       + +K  + +P KDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINY
Sbjct:  199 SSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 310          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BPE_ARATH (Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.774e-28
Identity = 68/114 (59.65%), Postives = 79/114 (69.30%), Query Frame = 1
Query:   46 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            K R + S S     +    E ++K+QK   V D K E +    + + +KK   EP KDYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY
Sbjct:   76 KRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETE-QKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 188          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.952e-28
Identity = 72/119 (60.50%), Postives = 84/119 (70.59%), Query Frame = 1
Query:   46 KNRTNASSSFNSAQSKDPREV----KSKKQKKGNVNDAKKEEKENSPKADSEKKVAKE-PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            K  T  SSS +   S  P  +    K++ +K  N N++K  E     K+  +K+ +KE PP DYIHVRARRGQATDSHSLAERVRREKISERM+ LQ LVPGCDKVTGKA MLDEIINY
Sbjct:   73 KTATTGSSSCDQL-SHGPSAITNTGKTRGRKARNSNNSK--EGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINY 188          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.952e-28
Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 1
Query:  103 EVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            E K  K+++   +D ++E +    K+++ K    EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK+LQ LVPGC+KVTGKA MLDEIINY
Sbjct:  261 EEKGGKRRREEEDDEEEEGEGEGNKSNNTKP--PEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINY 353          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.741e-28
Identity = 71/122 (58.20%), Postives = 90/122 (73.77%), Query Frame = 1
Query:   43 RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKE-NSP--KADSEKKVAKE---PPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            +K + N   +  +AQS   R  +S+++   N ++ + +E+  NSP  K++S K+  K+   PPKD YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC+KVTGKA MLDEIINY
Sbjct:  236 KKRKRNGQKNSEAAQSH--RSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINY 355          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH077_ARATH (Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.961e-27
Identity = 69/114 (60.53%), Postives = 77/114 (67.54%), Query Frame = 1
Query:   61 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSE---KKVAKEP--PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            ASSS  ++ SK   E    K  K +  D     K    K DS+   K  AK P  PKDYIHVRARRGQATDSHSLAER RREKISERM +LQ LVPGC+++TGKA MLDEIINY
Sbjct:  130 ASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINY 243          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH063_ARATH (Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.707e-27
Identity = 68/123 (55.28%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   34 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKK----EEKENSPKADSEKKVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            +KK+K   N        + +   + K  +Q  G+    KK     +KE +  ++   KV KE  K DYIHVRARRGQATDSHS+AERVRREKISERMK LQ LVPGCDK+TGKA MLDEIINY
Sbjct:  105 EKKKKMTMNRDDLVEEGEEE---KSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINY 224          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH076_ARATH (Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.832e-26
Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 1
Query:   64 SSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            SS       KD  E + KKQK       ++    N+ K +SEK+ +      YIH+RARRGQAT+SHSLAERVRREKISERMK LQ LVPGCDKVTGKA MLDEIINY
Sbjct:  174 SSKKRKRIGKDCEEEEDKKQKD------EQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINY 275          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH079_ARATH (Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25
Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 1
Query:   58 NASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD----SEKKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            ++SSS N  +    ++ K    + GN + + + E E S        +E+K   EPPKDYIHVRARRGQATD HSLAER RREKISE+M  LQ ++PGC+K+ GKA +LDEIINY
Sbjct:   92 SSSSSGNELKESGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINY 205          
BLAST of EG358372 vs. ExPASy Swiss-Prot
Match: BH074_ARATH (Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:   91 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 387
            +DP+    + QKK + ND  KE        + E   ++E PK+ YIH+RARRGQAT+SHSLAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINY
Sbjct:  166 EDPQRGNDQSQKK-HKNDQSKET------VNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 258          
The following BLAST results are available for this feature:
BLAST of EG358372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
BH062_ARATH1.358e-2862.50Transcription factor bHLH62 OS=Arabidopsis thalian... [more]
BPE_ARATH1.774e-2859.65Transcription factor BPE OS=Arabidopsis thaliana G... [more]
BH137_ARATH3.952e-2860.50Transcription factor bHLH137 OS=Arabidopsis thalia... [more]
BH078_ARATH3.952e-2866.32Transcription factor bHLH78 OS=Arabidopsis thalian... [more]
BH049_ARATH6.741e-2858.20Transcription factor bHLH49 OS=Arabidopsis thalian... [more]
BH077_ARATH1.961e-2760.53Transcription factor bHLH77 OS=Arabidopsis thalian... [more]
BH063_ARATH5.707e-2755.28Transcription factor bHLH63 OS=Arabidopsis thalian... [more]
BH076_ARATH2.832e-2660.19Transcription factor bHLH76 OS=Arabidopsis thalian... [more]
BH079_ARATH2.398e-2552.63Transcription factor bHLH79 OS=Arabidopsis thalian... [more]
BH074_ARATH2.398e-2561.00Transcription factor bHLH74 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank description6e9 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0006e9, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358372 ID=EG358372; Name=EG358372; organism=Citrus sinensis; type=EST; length=388bp
ACTGTGACGACTACCGCTACTACTACTCGTATGGACAAGAAAAGGAAGAA
CAGAACTAATGCTTCCTCTTCTTTCAATTCTGCTCAGTCAAAGGATCCAA
GAGAAGTGAAAAGCAAGAAGCAAAAGAAAGGCAATGTTAATGATGCCAAG
AAAGAAGAAAAGGAAAATAGTCCTAAAGCTGATAGTGAGAAGAAAGTTGC
TAAAGAACCTCCAAAAGATTACATTCATGTTAGAGCAAGGAGGGGTCAAG
CAACTGACAGCCACAGCTTAGCAGAAAGGGTAAGAAGAGAGAAAATTAGT
GAGAGGATGAAAATTTTGCAAAAGCTTGTTCCTGGCTGTGACAAGGTAAC
TGGTAAGGCCTTCATGTTGGATGAAATTATCAACTATG
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