EG358367

Overview
NameEG358367
Unique NameEG358367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length445
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6872 contig Csv1_Contig6872:1..445. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358367 vs. ExPASy Swiss-Prot
Match: YJBI_BACSU (Hemoglobin-like protein yjbI OS=Bacillus subtilis GN=yjbI PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.970e-11
Identity = 35/93 (37.63%), Postives = 51/93 (54.84%), Query Frame = 3
Query:  165 FRKLGLQTFINLSTNFYTRVYDDEEEWFRSIFANSNKEEAIQNQYEFFVQRMGGPPLYSQRKGHPALIGRHRPFPVTHQAAERWLHHMQIALD 443
            +  +G +    L   FY RV        + IF  S+  E  + Q +F  Q +GGPPLY++  GHP L  RH PFP+T++ A+ WL  M+ A+D
Sbjct:    9 YEAIGEELLSQLVDTFYERVAS--HPLLKPIFP-SDLTETARKQKQFLTQYLGGPPLYTEEHGHPMLRARHLPFPITNERADAWLSCMKDAMD 98          
The following BLAST results are available for this feature:
BLAST of EG358367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YJBI_BACSU2.970e-1137.63Hemoglobin-like protein yjbI OS=Bacillus subtilis ... [more]
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Properties
Property NameValue
Genbank description5d9 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0005d9, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358367 ID=EG358367; Name=EG358367; organism=Citrus sinensis; type=EST; length=445bp
ACGCGGGGGGCCACGCGCCAGCTAGCTACAGCCTACAGTGTTGAGCGAGG
GAGCGAGAGAGAGGGAGAGGATATTAGAGAGGAATGCAAACACTGCAAGA
GAAAGCCTCCGAGTGGAGCGGAGTTGACCCAGCGGACGCGTTCGCCATTG
ACGAAACCAACTTGTTTCGGAAGCTTGGCCTTCAAACTTTCATCAATCTC
TCCACCAACTTCTATACCAGGGTTTATGACGACGAGGAAGAGTGGTTTAG
GTCAATTTTTGCAAATTCGAATAAAGAAGAAGCAATTCAGAACCAATATG
AGTTTTTTGTGCAGAGAATGGGAGGGCCTCCTCTGTATTCTCAGAGGAAA
GGCCATCCTGCATTAATTGGACGTCATCGACCATTCCCAGTAACACATCA
AGCTGCAGAGAGATGGTTACATCATATGCAGATTGCACTAGACAG
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