EY664716

Overview
NameEY664716
Unique NameEY664716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2280 contig Csv1_Contig2280:36..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4)

HSP 1 Score: 377.481 bits (968), Expect = 2.118e-126
Identity = 180/225 (80.00%), Postives = 196/225 (87.11%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP+         KTPRGLRSLCTVWAQHL+EE+RRRFYKNW               ET++GKKDIQ+QLEKMKKYC+VIRVLAHTQIRKMKGLKQKKAHL EIQ+NGG +A+KVD+A   FEKQ+P+DA+FQKDEMIDIIGVTK
Sbjct:    1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKNWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTK 225          

HSP 2 Score: 60.077 bits (144), Expect = 2.118e-126
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GVVTRWGVTRLPRKTHRGLRK ACIG
Sbjct:  225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIG 256          

HSP 3 Score: 59.3066 bits (142), Expect = 2.118e-126
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  ARVS+TVARAGQNGYHHRTEMNKK
Sbjct:  251 KVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 284          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5)

HSP 1 Score: 368.622 bits (945), Expect = 1.609e-123
Identity = 179/225 (79.56%), Postives = 194/225 (86.22%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+VEKPGSKLHKKETCEAVTIIETP +         KTPRGLRSL TVWAQHL+EEVRRRFYKNW               +++DGKK IQAQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTK
Sbjct:    1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTK 225          

HSP 2 Score: 60.077 bits (144), Expect = 1.609e-123
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GVVTRWGVTRLPRKTHRGLRK ACIG
Sbjct:  225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIG 256          

HSP 3 Score: 58.5362 bits (140), Expect = 1.609e-123
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            +V  + AW  ARVS+TVARAGQNGYHHRTE+NKK   L
Sbjct:  251 KVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRL 288          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2)

HSP 1 Score: 363.229 bits (931), Expect = 3.881e-122
Identity = 173/225 (76.89%), Postives = 193/225 (85.78%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FPKDD SKPC LT+F+GYKAGMTHIVR+VEKPGSKLHKKETCEAVTIIETPPL         KTPRGLRSL +VWAQHL+EEVRRRFYKNWC              ++D GKK+IQ QLEKMKKY +++RV+AHTQIRKMKGLKQKKAHLMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTK
Sbjct:    1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTK 225          

HSP 2 Score: 60.077 bits (144), Expect = 3.881e-122
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GVVTRWGVTRLPRKTHRGLRK ACIG
Sbjct:  225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIG 256          

HSP 3 Score: 59.3066 bits (142), Expect = 3.881e-122
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  ARVS+TVARAGQNGYHHRTEMNKK
Sbjct:  251 KVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 284          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 1.973e-95
Identity = 140/225 (62.22%), Postives = 175/225 (77.78%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVTI+ETPP+         +TPRGLR+  TV+A+H+++E +RRFYKNW               + +DGKK ++     MKKYC VIRV+AHTQ+R +  L+QKKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTK
Sbjct:    1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTK 224          

HSP 2 Score: 53.9138 bits (128), Expect = 1.973e-95
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  ARV+F+VARAGQ GYHHRTE+NKK
Sbjct:  250 KVACIGAWHPARVAFSVARAGQKGYHHRTEINKK 283          

HSP 3 Score: 48.9062 bits (115), Expect = 1.973e-95
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GV +RW   +LPRKTHRGLRK ACIG
Sbjct:  224 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIG 255          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 2.572e-95
Identity = 149/225 (66.22%), Postives = 174/225 (77.33%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP  LTA +GYKAGMT +VRD+++PG+K+HKKE  EAVTIIETPPL         +TPRGLRSL TVWA+HL++EV+RRFYKNW                 ++G   I  +LE++KKYCTV+RVLAHTQIRK   LKQKKAHLMEIQVNGGSVA KVDFA   FEK I ID++F+KDEMID+I VTK
Sbjct:    1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTK 223          

HSP 2 Score: 50.447 bits (119), Expect = 2.572e-95
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG    GV +RWG  +LPRKTH+GLRK ACIG
Sbjct:  223 KGHGFQGVTSRWGTKKLPRKTHKGLRKVACIG 254          

HSP 3 Score: 44.2838 bits (103), Expect = 2.572e-95
Identity = 19/34 (55.88%), Postives = 23/34 (67.65%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  + V +TVARAGQ GYHHRT  N K
Sbjct:  249 KVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHK 282          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 288.886 bits (738), Expect = 5.691e-95
Identity = 139/225 (61.78%), Postives = 174/225 (77.33%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVTI+ETPP+         +TPRGLR+  TV+A+H+++E +RRFYKNW               + D GKK ++     MKKYC VIR++AHTQ+R +  L+QKKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTK
Sbjct:    1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTK 224          

HSP 2 Score: 53.9138 bits (128), Expect = 5.691e-95
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  ARV+F+VARAGQ GYHHRTE+NKK
Sbjct:  250 KVACIGAWHPARVAFSVARAGQKGYHHRTEINKK 283          

HSP 3 Score: 48.9062 bits (115), Expect = 5.691e-95
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GV +RW   +LPRKTHRGLRK ACIG
Sbjct:  224 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIG 255          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.642e-94
Identity = 138/225 (61.33%), Postives = 173/225 (76.89%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVTI+ETPP+         +TPRGLR+  TV+A+H+++E +RRFYKNW               + D GKK ++     MKKYC VIR++AHTQ+R +  L+QKKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTK
Sbjct:    1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTK 224          

HSP 2 Score: 55.4546 bits (132), Expect = 1.642e-94
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  ARV+FTVARAGQ GYHHRTE+NKK
Sbjct:  250 KVACIGAWHPARVAFTVARAGQKGYHHRTEINKK 283          

HSP 3 Score: 48.9062 bits (115), Expect = 1.642e-94
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GV +RW   +LPRKTHRGLRK ACIG
Sbjct:  224 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIG 255          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 1.048e-93
Identity = 137/225 (60.89%), Postives = 172/225 (76.44%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE  EAVTI+ETPP+         +TPRGLR+  T++A+H+++E +RRFYKNW               +  DGKK ++     MKKYC VIRV+AHTQ+R +  L+QKKAHLME+QVNGG+VA+K+D+A    E+Q+P+  VF +DEMID+IGVTK
Sbjct:    1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTK 224          

HSP 2 Score: 53.9138 bits (128), Expect = 1.048e-93
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + AW  ARV+F+VARAGQ GYHHRTE+NKK
Sbjct:  250 KVACIGAWHPARVAFSVARAGQKGYHHRTEINKK 283          

HSP 3 Score: 48.9062 bits (115), Expect = 1.048e-93
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GV +RW   +LPRKTHRGLRK ACIG
Sbjct:  224 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIG 255          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 2.319e-93
Identity = 136/225 (60.44%), Postives = 169/225 (75.11%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP  LTAF+ +KAGMTHIVR+V+KPGSK++KKE  EAVTI E PP+          TPRG R   TVWA+HL+E+ R RFYKNW               + +DG+K I+A L KMKKYC+ IRV+AHTQ++ MK  ++KKAH+MEIQ+NGG+VA+KVD+A    EKQ+P+D+VF +DEMID IGVTK
Sbjct:    1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVDKPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYKNWHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAHIMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTK 224          

HSP 2 Score: 54.299 bits (129), Expect = 2.319e-93
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            +V  + AW  +RV FTVARAGQ GYHHRTE+NKK   L
Sbjct:  250 KVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRL 287          

HSP 3 Score: 48.1358 bits (113), Expect = 2.319e-93
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GV +RW   +LPRKTH+GLRK ACIG
Sbjct:  224 KGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 255          
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3)

HSP 1 Score: 287.73 bits (735), Expect = 5.131e-93
Identity = 139/225 (61.78%), Postives = 174/225 (77.33%), Query Frame = 3
Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP  LTAFLGYKAGMTHIVR+V++PGSK++KKE   AVTI+ETPP+         +TPRGLR+  TV+A+H+++E +RRFYKNW               + +DGKK ++     MKKYC VIRV+AHTQ+R +  L+QKKAHLMEIQVNGG+VA+K+D+A    E+Q+P++ VF +DEMID+IGVTK
Sbjct:    1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTK 224          

HSP 2 Score: 48.9062 bits (115), Expect = 5.131e-93
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            KG+   GV +RW   +LPRKTHRGLRK ACIG
Sbjct:  224 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIG 255          

HSP 3 Score: 48.521 bits (114), Expect = 5.131e-93
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 2
Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  + A   ARV+F+VARAGQ GYHHRTE+NKK
Sbjct:  250 KVACIGARHPARVAFSVARAGQKGYHHRTEINKK 283          
The following BLAST results are available for this feature:
BLAST of EY664716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RL32_ARATH2.118e-12680.0060S ribosomal protein L3-2 OS=Arabidopsis thaliana... [more]
RL31_ARATH1.609e-12379.5660S ribosomal protein L3-1 OS=Arabidopsis thaliana... [more]
RL3_ORYSJ3.881e-12276.8960S ribosomal protein L3 OS=Oryza sativa subsp. ja... [more]
RL3_HUMAN1.973e-9562.2260S ribosomal protein L3 OS=Homo sapiens GN=RPL3 P... [more]
RL3_ASPFU2.572e-9566.2260S ribosomal protein L3 OS=Aspergillus fumigatus ... [more]
RL3_RAT5.691e-9561.7860S ribosomal protein L3 OS=Rattus norvegicus GN=R... [more]
RL3_MOUSE1.642e-9461.3360S ribosomal protein L3 OS=Mus musculus GN=Rpl3 P... [more]
RL3_BOVIN1.048e-9360.8960S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=... [more]
RL3_TOXCA2.319e-9360.4460S ribosomal protein L3 OS=Toxocara canis GN=RPL3... [more]
RL3_MACFA5.131e-9361.7860S ribosomal protein L3 OS=Macaca fascicularis GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664716 ID=EY664716; Name=EY664716; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGGTGCCGATTAGGATGTCTCATCGTAAGTTTGAACACCCA
AGACATGGTTCTTTAGGATTTCTTCCAAGGAAGAGAGCATCCCGCCACAG
AGGAAAAGTGAAGGCCTTTCCCAAGGATGACCCATCAAAACCATGCAGAT
TAACTGCTTTTTTAGGCTACAAAGCTGGAATGACCCATATTGTCAGAGAT
GTTGAAAAGCCAGGATCAAAGCTGCACAAGAAAGAAACATGTGAAGCAGT
AACTATTATTGAAACACCACCCCTGGTGGTTGTTGGGGTCGTTGGTTATG
TCAAGACGCCCCGTGGGCTTCGTTCTCTCTGCACTGTTTGGGCTCAGCAT
CTCAATGAGGAGGTTAGGAGAAGGTTTTACAAGAACTGGTGCAAATCGAA
GAAGAAGGCCTTCACTAAGTATACAAAGAAGTATGAAACTGATGATGGAA
AGAAAGACATTCAGGCTCAGCTGGAGAAAATGAAGAAATACTGCACCGTG
ATTCGTGTTTTGGCCCATACCCAGATCAGAAAAATGAAGGGACTGAAGCA
GAAGAAGGCCCATCTGATGGAGATCCAGGTCAATGGTGGATCAGTTGCCC
AGAAGGTTGACTTTGCTTATGGTTTCTTCGAGAAACAGATTCCTATTGAT
GCTGTGTTCCAGAAAGATGAGATGATTGACATTATTGGTGTGACCAAAGG
GTAGGGATATGANGGGTGTTGTTACTCGTTGGGGTGTTACTCGTCTCCCT
CGTAAGACTCACCGTGGTCTACGCAAGGGTGCTTGTATTGGNTGCCTGGN
CATCCGCTAGGGTCTCCTTTACTGTTGCTAGAGCTGGGCAGAACGGCTAC
CATCACCGTACAGAGATGAACAAGAAATTTACAAGCTTGGAAAGCCACCC
AAGATTCT
back to top