EG358355

Overview
NameEG358355
Unique NameEG358355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358355 vs. ExPASy Swiss-Prot
Match: TIF3B_ARATH (Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.332e-11
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 2
Query:  110 STASALASPRAQSXPXQRNXLCKLQAELPMAXRHSLQRXFEKRRDRLVSKNPYPVQSEAKASD 298
            S+ S +ASP AQ  P Q    C+  A+LP+A RHSLQR  EKRRDRLV+KNPYP  S+ K +D
Sbjct:  111 SSTSNVASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDRLVNKNPYPT-SDFKKTD 172          
The following BLAST results are available for this feature:
BLAST of EG358355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TIF3B_ARATH1.332e-1157.14Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B ... [more]
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Properties
Property NameValue
Genbank description3d7 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0003d7, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358355 ID=EG358355; Name=EG358355; organism=Citrus sinensis; type=EST; length=546bp
TTTGGNGGCCTTTTTTGGCCCNNTTTTNTAACCCCAAGGGGNCCTGNAGA
AGGGGGNNCCCAATTTTCTGCCTTTTCACCAGNTNTAACAAGGTNTCNTT
CACTGCNAAAGCACTGCAAGTGCTTTGGCATCCCCTCGGGCACAATCATN
TCCTGNTCAAAGGAATNTCCTCTGCAAATTGCAAGCTGAACTACCAATGG
CANGGAGGCACTCCCTTCAGCGANTTTTCGAGAAGCGACGTGACAGGCTG
GTGAGCAAGAATCCATATCCTGTTCAATCAGAGGCAAAAGCTTCTGACAC
CAAAGCTCAGACTCCTGCAGAGGCAGGTTGCTTTGAGAAAACTTCCGTGC
CTCAGGAAGAATTGCAACCTAAGGCTGCAGCCAATGTTGCATAAATTATC
TATCATGCTTAGATGTTTGTAGTAAATAATCCAGAACTATCTACTTAGAT
AAACTAGACATTGCTGTATTGTTTGTGTGAAAAACCCAAGCGCACAGGGT
GTGATGATGTTTGCATTGCTTTTGGAATTTGTAGGAATGGCGTGTG
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