EG358341

Overview
NameEG358341
Unique NameEG358341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6867 contig Csv1_Contig6867:1..483. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.915e-15
Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETS----NNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 346
            V++ +V +VT+FL++HPGG+EVL+ A GKDAT  FE++GHS +A  +L  Y VG +    +  T+T     N   + + K  E   FVVK         LL+F VPL++ G  F  R+
Sbjct:   25 VISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVGDIDSATI-PTKTKYTPPNQPHYNQDKTSE---FVVK---------LLQFLVPLIILGVAFGIRF 129          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 346
            +++ +V NVT+FLE+HPGG EVL+ A GKDAT  FE+IGHS +A  +L  Y VG      ++ +       +  PK+        +D        LL+F VPL++ G  F   +
Sbjct:   25 IISGKVYNVTKFLEDHPGGGEVLLSATGKDATDDFEDIGHSSSARAMLDEYYVG-----DIDSSTIPTKVKYTPPKQPHYN----QDKTTEFIVKLLQFLVPLIILGVAFGVHF 129          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.621e-14
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAG 325
            V+  +V NVT+FLE+HPGG++VL+ + GKDAT  FE++GHS++A E++  Y VG     +++ T       +  PK+        +D        LL+F VPL + G
Sbjct:   25 VINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVG-----EIDPTTIPKKVKYTPPKQPHYN----QDKTSEFIIKLLQFLVPLAILG 122          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13
Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKK-----KEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 346
            ++  +V +VT+FLE+HPGG++VL+ A GKDAT  FE+IGHS +A  +L  Y VG      ++ +   +   +  PK+      +   FV+K         LL+F VPL++       R+
Sbjct:   22 IINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVG-----DIDSSSIPSQVKYTPPKQPLYNPDKTREFVIK---------LLQFLVPLVILAGAIGIRF 126          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.341e-13
Identity = 37/117 (31.62%), Postives = 66/117 (56.41%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTET---SNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 346
            +++ +V +VT F+++HPGG+EVL+ + GKDAT  FE++GHS  A +++  Y +G +    +  T T       ++ + K  E   F++K         +L+F VP+L+ G     R+
Sbjct:   25 IISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPE---FIIK---------ILQFLVPILILGLALVVRH 129          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB5_MUSDO (Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.894e-13
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKE 241
            ++   V +VT FL EHPGGEEVL+E AGKDAT+ FE++GHS  A E++  Y+VG L   +  +    +  ++   +K E
Sbjct:   26 IIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELVAEERSNVPEKSEPTWNTEQKTE 104          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.162e-12
Identity = 30/74 (40.54%), Postives = 53/74 (71.62%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQE 226
            ++  +V N++ +++EHPGGEEV+++ AG DAT+ F++IGHS  AHE+L    +G L+G K+ + + + + S +E
Sbjct:   28 ILNGKVYNISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLKGAKIVEAKHAQSFSTEE 101          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.517e-12
Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAG 325
            +++ +V +VT F+++HPGG+EVL+ + GKDAT  FE++GHS  A +++  Y +G +    +  T T          + +   F++K         +L+F VP+L+ G
Sbjct:   25 IISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIGEIDSSTVPATRTYVAPVQPAYNQDKTPEFMIK---------ILQFLVPILILG 122          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB5B_PONAB (Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.517e-12
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVP 310
            V+   V +VTRFL EHPGGEEVL+E AG DA++ FE++GHS  A E+L  Y +G +    L+    S + S  +  K     +++   G      L  ++ P
Sbjct:   40 VIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPENGSKDPSKNDTCKSCWAYWILPIIGAVLLGFLYRYYTP 141          
BLAST of EG358341 vs. ExPASy Swiss-Prot
Match: CYB5B_MOUSE (Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.517e-12
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 2
Query:    5 VVAAEVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKL----EDTETSNNASFQ 223
            V+   V ++TRFL EHPGGEEVL+E AG DAT+ FE++GHS  A E+L  Y +G +    L    +D + S N S Q
Sbjct:   40 VIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPSDLKPKGDDKDPSKNNSCQ 116          
The following BLAST results are available for this feature:
BLAST of EG358341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CYB5_TOBAC1.915e-1539.83Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
CYB5S_TOBAC4.265e-1536.84Cytochrome b5, seed isoform OS=Nicotiana tabacum P... [more]
CYB52_ARATH1.621e-1437.38Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
CYB5_BOROF1.792e-1334.45Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB51_ARATH2.341e-1331.62Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
CYB5_MUSDO8.894e-1343.04Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV... [more]
CYB5_CANTR1.162e-1240.54Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB5_BRAOB1.517e-1231.78Cytochrome b5 OS=Brassica oleracea var. botrytis G... [more]
CYB5B_PONAB1.517e-1237.25Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2... [more]
CYB5B_MOUSE1.517e-1248.05Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1... [more]

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Properties
Property NameValue
Genbank description9h1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009h1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358341 ID=EG358341; Name=EG358341; organism=Citrus sinensis; type=EST; length=483bp
TAGCGTGGTCGCGGCCGAGGTACTGAACGTTACAAGGTTCCTGGAAGAAC
ACCCAGGAGGAGAGGAAGTGCTGATGGAGGCGGCAGGGAAGGATGCAACA
AAGCAGTTTGAGGAAATTGGACACAGCAAGGCTGCTCACGAGTTGCTCTT
CAACTACCGGGTGGGTGTTCTTCAAGGTTACAAGTTAGAAGACACAGAAA
CATCCAATAATGCTTCATTCCAGGAGCCCAAAAAGAAAGAGATGGAGGCT
TTTGTCGTCAAGGATAATGGCGTGCCTAAATATGCAGCTCTTCTCGAGTT
CTTTGTGCCACTCTTGGTTGCTGGTTCCTACTTTGCTTACAGGTATCTGG
CCTGAGCCCAGAACATCCTTGACTGGATCATCCGCTTCCTCTTATATGTC
TGCTTGATGAATTGCTGCAAGTCTCGCTGTCAGTAGGCAAGGCAACGAAT
GATTTAACCATGTACCTGCCCGGGCGGCCGCTC
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