CX672138

Overview
NameCX672138
Unique NameCX672138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6979 contig Csv1_Contig6979:19..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX672138 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.710e-21
Identity = 53/130 (40.77%), Postives = 71/130 (54.62%), Query Frame = 1 
Query:  397 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVXXXXXXXXXXXTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGG 786
            G G Y++ + IGTP +  S I DTGSDL WTQC+PC + C+ Q  P F+P              +C +L     +SP C+++ C Y   YGD S + G  G ETLT     + PN  FGCG+NN+G   G
Sbjct:   91 GDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQ-CFNQSTPIFNPQGSSSFSTLPCSSQLCQAL-----SSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSVSI-PNITFGCGENNQGFGQG 213
[Close]
BLAST of CX672138 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.976e-21
Identity = 59/171 (34.50%), Postives = 81/171 (47.37%), Query Frame = 1 
Query:  274 LRQDQSRVKSIHSRLSKNSGSLDEIRQSDDATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVXXXXXXXXXXXTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGG 786
            +++ + R++SI++ L  +SG    +   D              G Y++ V IGTP    S I DTGSDL WTQCEPC + C+ Q  P F+P               C  L S T     C ++ C Y   YGD S + G+   ET T     V PN  FGCG++N+G   G
Sbjct:   65 IKRGERRMRSINAMLQSSSGIETPVYAGD--------------GEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQ-CFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSET-----CNNNECQYTYGYGDGSTTQGYMATETFTFETSSV-PNIAFGCGEDNQGFGQG 214
The following BLAST results are available for this feature:
BLAST of CX672138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR1.710e-2140.77Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR4.976e-2134.50Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_15B12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B12-D23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672138 ID=CX672138; Name=CX672138; organism=Citrus sinensis; type=EST; length=792bp
CTTAAATTTATTCTCTCTGCTTATCTTCTCTCACTAAGCCTTTGCTATGC
TTTCGAAGAAAGAGTCGCCGCAGAAAGCCAACATGAGCTTCAACATATGC
ATACAATTCAACTCAGCTCTCTTCTTCCATCATCTGTTTGCAATCCTTCC
ACAAAAGGCAATGCGAAGAAATCATCGTTGAAAGTCGTGCACAAGCACGG
TCCATGTTTCAAGCCTTATAGTAATGGAGAAAAAGCAGCGTCTCCATCAC
CATCAGTATCACATGCAGAGATCCTTCGGCAAGACCAGTCTAGAGTTAAA
TCAATCCACTCAAGACTCTCTAAGAACTCAGGCAGCCTTGATGAGATCAG
GCAGTCGGACGACGCCACGCTCCCCGCCAAGGACGGTAGCGTCGTGGGTG
CCGGCAATTACATTGTCACGGTGGGTATTGGTACCCCCAAGAAAGATTTA
TCCCTCATTTTTGACACCGGAAGTGACCTCACATGGACTCAATGTGAGCC
TTGCGTCAAATACTGCTATGAACAAAAGGAGCCAAAATTTGACCCCACCG
TGTCCCAATCATATAGCAACGTGTCTTGCTCGTCGACAATCTGCACTTCG
CTCCAATCAGCCACAGGTAACTCACCAGCTTGTGCATCATCCACATGCCT
CTATGGGATTCAATACGGAGACTCATCATTCTCCATTGGCTTCTTCGGGA
AAGAAACCCTAACCCTGACACCCAGGGACGTTTTCCCTAACTTCCTCTTC
GGCTGCGGCCAAAACAACCGCGGGCTCTTCGGCGGCGCTGCC
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