CX672135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS23_FRAAN (40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.065e-71 Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGKTRGMGA RKLK+HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD Sbjct: 1 MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 113 HSP 2 Score: 59.3066 bits (142), Expect = 3.065e-71 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 113 DIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS23_EUPES (40S ribosomal protein S23 OS=Euphorbia esula GN=RPS23 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.565e-70 Identity = 110/113 (97.35%), Postives = 110/113 (97.35%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGKT GMGA RKLKSHRR QRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD Sbjct: 1 MGKTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 113 HSP 2 Score: 59.3066 bits (142), Expect = 2.565e-70 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 113 DIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS232_ARATH (40S ribosomal protein S23-2 OS=Arabidopsis thaliana GN=RPS23B PE=2 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 1.795e-68 Identity = 108/113 (95.58%), Postives = 108/113 (95.58%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGKTRGMGAGRKLK R QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD Sbjct: 1 MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 113 HSP 2 Score: 59.3066 bits (142), Expect = 1.795e-68 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 113 DIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS231_ARATH (40S ribosomal protein S23-1 OS=Arabidopsis thaliana GN=RPS23A PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 8.053e-66 Identity = 105/113 (92.92%), Postives = 106/113 (93.81%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGKTRGMGAGRKLK R QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD Sbjct: 1 MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 113 HSP 2 Score: 59.3066 bits (142), Expect = 8.053e-66 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 113 DIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS23_LUMRU (40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.468e-58 Identity = 92/114 (80.70%), Postives = 99/114 (86.84%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGK RG+ RKLK+HRR QRW DK YKKSHLG WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKKI AFVP DGCLN+IEENDEVL+AGFGRKGHAVGD Sbjct: 1 MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGD 114 HSP 2 Score: 52.373 bits (124), Expect = 1.468e-58 Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKV+ VSLLAL+K+KKE+PRS Sbjct: 114 DIPGVRFKVVKVASVSLLALYKQKKERPRS 143
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS23_DERVA (40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 5.529e-58 Identity = 91/114 (79.82%), Postives = 98/114 (85.96%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGK RG+ RK +SHRR QRW DK YKK+HLG WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKKI AFVP DGCLNYIEENDEVL+AGFGRKGHAVGD Sbjct: 1 MGKPRGLRTARKHRSHRRDQRWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGD 114 HSP 2 Score: 53.5286 bits (127), Expect = 5.529e-58 Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 114 DIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS23_SPOFR (40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 4.616e-57 Identity = 88/114 (77.19%), Postives = 98/114 (85.96%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGK RG+ RK +HRR QRWADK YKK+H+G WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKK+ AFVP DGCLN+IEENDEVL+AGFGRKGHAVGD Sbjct: 1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGD 114 HSP 2 Score: 53.5286 bits (127), Expect = 4.616e-57 Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 114 DIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS23_PAPDA (40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 4.616e-57 Identity = 88/114 (77.19%), Postives = 98/114 (85.96%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGK RG+ RK +HRR QRWADK YKK+H+G WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKK+ AFVP DGCLN+IEENDEVL+AGFGRKGHAVGD Sbjct: 1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGD 114 HSP 2 Score: 53.5286 bits (127), Expect = 4.616e-57 Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 114 DIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS23_DROME (40S ribosomal protein S23 OS=Drosophila melanogaster GN=RpS23 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.023e-56 Identity = 90/114 (78.95%), Postives = 97/114 (85.09%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGK RG+ RK +HRR QRWADK YKK+HLG WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKKI AFVP DG LNYIEENDEVL+AGFGRKGHAVGD Sbjct: 1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGD 114 HSP 2 Score: 53.5286 bits (127), Expect = 1.023e-56 Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 114 DIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CX672135 vs. ExPASy Swiss-Prot
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.739e-56 Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = -2 Query: 326 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGD 664 MGK +G+ A RKLK+HR+ QRW DK YKK+HLG WK PF +SHAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKKI AFVPNDGCLN+IEENDEVL+AGFGRKGHAVGD Sbjct: 1 MGKPKGIRAARKLKTHRQAQRWNDKGYKKAHLGTRWKANPFGTASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGD 114 HSP 2 Score: 49.2914 bits (116), Expect = 1.739e-56 Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = -3 Query: 241 EIPGVRFKVVKVSGVSLLALFKEKKEKPRS 330 +IPGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 114 DIPGVRFKIVKVANTSLIALFKGKKERPRS 143 The following BLAST results are available for this feature:
BLAST of CX672135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672135 ID=CX672135; Name=CX672135; organism=Citrus sinensis; type=EST; length=725bpback to top |