CX672119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 313.153 bits (801), Expect = 1.005e-84 Identity = 155/202 (76.73%), Postives = 176/202 (87.13%), Query Frame = -2 Query: 149 AAAVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILETDEIKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 754 AA+VVAPKYTSIKPLGDRVLVKIK EEKT GGI LP AQ+KPQ GEVVAVGEG+T+GK K+DI+V G Q+IYSKYAGTE+EFN H I++EDD+VGILET++IKD KPLNDRVFIKVAEAEE TAGGLLLTE +KEKPSIGTVIAVGPG LDEEG PL ++ G+TV+YSKYAGNDFKG DG+NYIALRA +VMA+L Sbjct: 51 AASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.650e-77 Identity = 137/202 (67.82%), Postives = 166/202 (82.18%), Query Frame = -2 Query: 149 AAAVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILETDEIKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 754 AA++ KYTS+KPLGDRVL+K K VEEKT GIFLP AAQ KPQ+GEVVA+G GK VG KL ++VK G +V+YSKY GTE+E +G++H IV+EDD++GILETD++KD KPLNDR+ IKVAE E T+GGLLL E+SKEKPS GTV+A GPG LDEEGNR PL + GNTV+YSKYAGNDFKG DG++Y+ LR +VMAVL Sbjct: 53 AASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYMVLRVSDVMAVL 254
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.062e-21 Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 ++KPLGDR+++KI EEKT+ GI LP A+ KPQ GEVVAVG GKT+ +K++ VK G +V+YSK+AG E+E +G + I+R+DD++ ++E Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95 HSP 2 Score: 83.5741 bits (205), Expect = 1.295e-15 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL DR+ IK+ EAEE T G++L E +KEKP G V+AVG G ++G++ + G+ V+YSK+AGN+ + DG Y+ +R +++AV+ Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVE-VDGEEYLIMRQDDILAVI 94
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21 Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G + ++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14 Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR +++A++ Sbjct: 4 KPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21 Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G + ++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14 Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR +++A++ Sbjct: 4 KPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21 Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G + ++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14 Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR +++A++ Sbjct: 4 KPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21 Identity = 45/95 (47.37%), Postives = 69/95 (72.63%), Query Frame = -2 Query: 437 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILETDE 721 IKPL DRV++K + EEKT+ G+++P A+ KPQ G V+AVG G+ K+++SVK G +V+Y KYAGTE+ +G + I+RE D++GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100 HSP 2 Score: 78.5666 bits (192), Expect = 4.165e-14 Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL+DRV IK EE T GL + + +KEKP GTVIAVGPG + E G + +S+ G+ V+Y KYAG + DG Y+ +R +++ ++ Sbjct: 7 KPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRV-ENGTKIEMSVKEGDKVLYGKYAGTEIT-IDGEEYLIMRETDILGII 96
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THEVL (10 kDa chaperonin OS=Thermosynechococcus vulcanus GN=groS PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 46/96 (47.92%), Postives = 70/96 (72.92%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 HSP 2 Score: 92.8189 bits (229), Expect = 2.134e-18 Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDR+ VK+ EE+T GGI LP A+ KPQ GEV AVG GK K + VK G +V+YSKYAGTE++ G ++ ++ E D++ I+ Sbjct: 2 AAVSLSVSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLAGEDYVLLSEKDILAIV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THEEB (10 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groS PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 46/96 (47.92%), Postives = 70/96 (72.92%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 HSP 2 Score: 92.8189 bits (229), Expect = 2.134e-18 Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDR+ VK+ EE+T GGI LP A+ KPQ GEV AVG GK K + VK G +V+YSKYAGTE++ G ++ ++ E D++ I+ Sbjct: 2 AAVSLSVSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLAGEDYVLLSEKDILAIV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20 Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 ++KPL DRVLVK EEKT GG+++P A+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G H ++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 39/94 (41.49%), Postives = 64/94 (68.09%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG + K DG ++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94 The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bpback to top |