EY664651

Overview
NameEY664651
Unique NameEY664651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY664651 vs. ExPASy Swiss-Prot
Match: UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17
Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 2 
Query:  161 PPAHFLLKIQTFSSLLENKVESYESSEFNVGSHKWKLVLYPNGNKKKKVKDHISLYLAMADSSSFGFGWEVFVIFRLFVHDQNEDTYLIPQDAMGNERRFHGLKLEWGFDQFIPLKEFNDASNGYLVGDTCVFGAEVFVKE 583
            P   F   I  FS         + S  F VG +KW+++++P GN      DH+S+YL ++D++S  +GW  +  F L V +Q    Y + ++    + +F+  + +WGF  F+PL E  D S GYLV DT +  AEV V++
Sbjct:   53 PTLKFTWTIPNFS---RQNTRKHYSDVFVVGGYKWRILIFPKGNNV----DHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIHTRYTVRKET---QHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183
[Close]
BLAST of EY664651 vs. ExPASy Swiss-Prot
Match: UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.544e-17
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 2 
Query:  161 PPAHFLLKIQTFSSLLENKVESYESSEFNVGSHKWKLVLYPNGNKKKKVKDHISLYLAMADSSSFGFGWEVFVIFRLFVHDQNEDTYLIPQDAMGNERRFHGLKLEWGFDQFIPLKEFNDASNGYLVGDTCVFGAEVFVKE 583
            P   F   I  F+ L   K   + S  F VG +KW+++++P GN      DH+S+YL +AD+++  +GW  +  F L V +Q  + Y I ++    + +F+  + +WGF  F+PL E  + + GYLV DT +  AEV V++
Sbjct:   52 PSLKFTWTIPMFTRLNTRK---HYSDVFVVGGYKWRILIFPKGNNV----DHLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKET---QHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 182
The following BLAST results are available for this feature:
BLAST of EY664651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UBP12_ARATH1.319e-1734.04Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabid... [more]
UBP13_ARATH6.544e-1734.04Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664651 ID=EY664651; Name=EY664651; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCCCACGCGTCCGGATAACTCTAACCCTTAAAAATCTTAT
TCTAATCAATCTTTCTTCTATACTCTTTTTAGTACTTGAAGAGTTATAGT
AGTTTGAAGGAATTTGTTGCAATGGAAAATCAAGTTGTTTCAATATCCAT
TTCACATGTACCACCGGCTCATTTCCTACTCAAAATACAGACATTTTCGT
CCCTTCTAGAAAATAAAGTGGAAAGTTATGAATCTTCGGAATTTAATGTT
GGAAGCCACAAATGGAAACTTGTTTTGTACCCAAATGGAAATAAAAAAAA
AAAGGTGAAAGATCACATCTCACTCTACTTGGCAATGGCAGACTCAAGTT
CTTTTGGTTTCGGTTGGGAAGTCTTTGTGATTTTTCGCCTGTTTGTGCAT
GATCAGAACGAAGACACGTACTTGATTCCTCAAGATGCAATGGGAAATGA
AAGACGTTTTCATGGGTTGAAGCTTGAATGGGGTTTTGATCAATTCATCC
CGCTTAAAGAATTTAACGATGCGTCAAATGGATATCTTGTGGGAGATACA
TGTGTTTTTGGAGCAGAAGTCTTTGTTAAAGAAAGGAACATAGTCAAAGG
AGAGTGCCTTTCCATGAAGAAATTCACATCTGCTTCCCCTTATAAGTATG
TTTGGGAAGATCAAGAACTTTTCAAACTTGGNAGCAAAGCGTTACGAATC
ANAAGTATTNCGTGCTGGAGATCAAAAGTGGAAGATACAACTCTATCCCA
AGGGATACCGAGTAACTAGTGGCAGTCATATTTCTATGTACTTGGCATTG
GCTGACTTGTCACTATAACTCGGGGTTTTAAAAATACGTGCATTTACACT
GCGAATTCCGATTCAAG
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