EY664643

Overview
NameEY664643
Unique NameEY664643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig454 contig Csv1_Contig454:676..1305. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY664643 vs. ExPASy Swiss-Prot
Match: Y4744_ARATH (Uncharacterized protein At4g06744 OS=Arabidopsis thaliana GN=At4g06744 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.140e-24
Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = 3 
Query:   12 VGNNRLTGPIPHSFGCLSGMQFLNLAMNQFYGPVPEIVCQLPK--LVNLSLSYNYFTQVGPECRKLIKRKVLDVRMNCILDLPNQRSREECGKFFSESKK--CPNERSLTLVPCARNRYTLNLTETFDKKLTAPAP 407
            +G N+LTGP+P S  CL  ++ LN A N  +G VPE VC L +  LVNLSLS NYFT VGP CR L+++ VLDV  NCI   P QRS +EC +FF + KK  CP+    +   C  +  + + +  F   + AP+P
Sbjct:  270 IGGNKLTGPLPLSLMCLEKVEQLNFAGNLLFGAVPEAVCMLLRDNLVNLSLSDNYFTHVGPWCRGLLEKGVLDVGNNCIPFFPGQRSMQECAEFFVKPKKYYCPHMWFHSFFSCRYSHISSSSSSAF-MPMVAPSP 404
The following BLAST results are available for this feature:
BLAST of EY664643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4744_ARATH4.140e-2445.59Uncharacterized protein At4g06744 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664643 ID=EY664643; Name=EY664643; organism=Citrus sinensis; type=EST; length=630bp
CCACGCGTCCGGTGGGCAACAACCGCTTGACTGGCCCGATACCGCACTCA
TTCGGATGCTTGTCCGGCATGCAATTCCTGAACTTGGCTATGAACCAATT
TTACGGGCCAGTGCCGGAGATTGTGTGCCAGCTGCCGAAGCTTGTCAACC
TGTCTCTGTCTTACAATTATTTTACTCAGGTTGGTCCTGAATGCAGGAAA
TTGATAAAGAGAAAGGTTCTTGATGTGAGAATGAACTGCATTTTGGATCT
TCCGAATCAGAGATCGCGGGAGGAGTGCGGGAAATTCTTCTCCGAGTCAA
AGAAGTGTCCGAACGAGAGGTCGTTGACTTTGGTTCCTTGTGCGAGGAAT
CGTTATACATTGAATTTAACCGAGACGTTTGATAAAAAATTAACGGCTCC
AGCTCCATCACCTAGGACTTATGATGCCCTCAAAAAGCATTTCTGATGAT
ACCTATCATCATATGTAGTGCAACCAAATCTGCATTCATCCAAGATGATT
GATTGTTGCTATTTGTACGTAATTCTCCTACGTTTCTAAGTGATTTATAT
GTTCTCCGTAGAAGCCATGTAAACTAGTTATTTCCAATCCAATAAATCAA
TTTTTATTTAAAAAAAAAAAAAAAAAAAAA
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