EY664640

Overview
NameEY664640
Unique NameEY664640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2216 contig Csv1_Contig2216:940..1582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.604e-40
Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L  Y+ YQ+LSSALEKMFSCFT+GQ G HGA GRE +SE KLKDLLHGSEFVLTYEDKDGDWMLVGDVPWE+F +TC++L+IMK +D+IGLAP AVEK
Sbjct:  217 LRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEK 314          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.631e-39
Identity = 75/99 (75.76%), Postives = 87/99 (87.88%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 308
            L+ Y  Y ELSSALEKMFSCFTIGQ+GSHG  GR+ L+ES+L DLL GSE+V+TYEDKD DWMLVGDVPWEMFI +CK+LRIMKS++AIGLAPR +EKC
Sbjct:  203 LKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKC 301          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.400e-37
Identity = 74/100 (74.00%), Postives = 88/100 (88.00%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGL--APRAVEK 305
            L +Y+ Y ELSSALEKMF+ FT+GQ GS+GA G++MLSE+KLKDLL+G ++VLTYEDKDGDWMLVGDVPWEMFID CK+L+IMK  DAIGL  APRA+EK
Sbjct:  234 LRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEK 333          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.182e-35
Identity = 71/99 (71.72%), Postives = 83/99 (83.84%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 308
            L+ Y  Y ELS ALEKMFS FTIG  GSHG  G   ++ESK+ DLL+GSE+V TYEDKDGDWMLVGDVPWEMF+++CKRLRIMK ++AIGLAPRA+EKC
Sbjct:  178 LKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG---MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKC 273          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.579e-34
Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 308
            L+ Y  YQ+LS+AL KMFS FTIG YG  G   ++ ++ESKL DLL+GS++V TYEDKDGDWMLVGDVPWEMF+D+CKR+RIMK ++AIGLAPRA+EKC
Sbjct:  136 LKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKC 232          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.478e-32
Identity = 65/98 (66.33%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ Y  Y+ELS ALEKMFSCFT+G   S+G  GR+ LS+ +L DL +G+E VLTYEDKD DWMLVGDVPW MF D+C+RLRIMK +DA+GLAPRA +K
Sbjct:  164 LKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDK 261          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.336e-32
Identity = 63/98 (64.29%), Postives = 82/98 (83.67%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ Y  YQ+LS AL KMFS FT+G YG+ G +  + ++ESKL +LL+ SE+V +YEDKDGDWMLVGDVPWEMF+++CKRLRIMK ++A+GLAPRA+EK
Sbjct:  142 LKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEK 237          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.641e-31
Identity = 62/98 (63.27%), Postives = 82/98 (83.67%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ Y+ Y++LS AL KMFS FT+G YG+ G +  + ++ESK+ DLL+ SE+V +YEDKDGDWMLVGDVPW MF+++CKRLRIMK ++AIGLAPRA+EK
Sbjct:  128 LKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEK 223          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.171e-29
Identity = 60/99 (60.61%), Postives = 77/99 (77.78%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 308
            L  Y  Y ELS+AL  MFS FT+G++G    +  + ++E KL DL++  ++V +YEDKDGDWMLVGDVPW MF+DTCKRLR+MK +DAIGLAPRA+EKC
Sbjct:  128 LRMYKSYDELSNALSNMFSSFTMGKHGGEEGM-IDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKC 225          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 63/101 (62.38%), Postives = 78/101 (77.23%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAI--GLAPRAVEKC 308
            L+ Y  Y+ELS +L KMFS FT G   S G   ++ ++ESKL DLL+ S++V TYEDKDGDWMLVGDVPWEMF+++CKRLRIMK  +AI  GLAPRA+ KC
Sbjct:  141 LKMYKSYRELSDSLGKMFSSFTFGNCESQGM--KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKC 239          
The following BLAST results are available for this feature:
BLAST of EY664640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
IAA8_ARATH5.604e-4077.55Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA27_ARATH1.631e-3975.76Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA9_ARATH3.400e-3774.00Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA30_ORYSJ3.182e-3571.72Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA16_ARATH1.579e-3468.69Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
IAA21_ORYSJ1.478e-3266.33Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]
IAA7_ARATH7.336e-3264.29Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA14_ARATH3.641e-3163.27Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA17_ARATH1.171e-2960.61Auxin-responsive protein IAA17 OS=Arabidopsis thal... [more]
AUX28_SOYBN4.451e-2962.38Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664640 ID=EY664640; Name=EY664640; organism=Citrus sinensis; type=EST; length=643bp
CCACGCGTCCGCTTGAAAATTACTCTAAATATCAGGAACTATCTTCTGCC
CTTGAGAAGATGTTCAGCTGCTTTACAATTGGGCAATATGGATCTCATGG
GGCTCTGGGCAGGGAGATGCTGAGTGAAAGCAAGTTGAAGGATCTGCTAC
ATGGCTCAGAATTCGTTCTCACTTATGAAGACAAAGATGGGGATTGGATG
CTTGTGGGTGATGTCCCCTGGGAGATGTTTATTGATACATGCAAGAGGTT
GAGGATTATGAAGAGCACTGATGCCATTGGCCTAGCGCCAAGGGCTGTGG
AGAAATGCAGGAACAGAAACTAGCTACTGTTCAACATATTGTTGGTATTC
ATCCAGCAATTCTCGGTGATAAAATTCTGGCAGATGACAGAAAATAACAT
GATCCAAATTCATGCTTGGGGGTGTTGGAGGGCATCTGCTTTTCTGTGTT
ACCACATTACTACGTTTACTGTGATGGATTTTCATGTTCTGTAAGCTGTG
ATTGTTGTCTTGTTATTAAAATTATAAAACTCTCGTAGACCTTGTATTTT
GGAGTGAACCTCTGAGATTGGATCTCCTCAAGGAGTTCTGACAAGTTCCT
GTTCCCAACAGGTACCTTAGTTTGTAAAAAAAAAAAAAAAAAA
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