EY664635

Overview
NameEY664635
Unique NameEY664635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12570 contig Csv1_Contig12570:80..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664635 vs. ExPASy Swiss-Prot
Match: Y5175_ARATH (UPF0706 protein At5g01750 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.326e-64
Identity = 111/185 (60.00%), Postives = 149/185 (80.54%), Query Frame = 2
Query:  122 PQYCLPYPVDLSIVRKFLTLTDGRFAVTDINDNLMFKVKEKLISLHDKRTLLDPAGNPIVTITEKVFSLHEKHFVFRGASTDTKDLLFTVERSSVIQLKTTLNVYLASNTKQDVCDFKIKGSWTEKSCVGYAGESNTIVAQMRKKTTAGSVLLNKDRFTVTVYPDIDYAFIVALIVILDDINGDE 676
            P+YC PYP+D++IVRK ++LTDG F +TD+N NL+FKVKE +  LHDKR LLD +G P+VT+ EK+ S+H++  VFRG STD +DLL+TV+RSS++QLKT L+V+L  N  +  CDF++KGSW E+SCV YAGES+ IVAQM +K T  SV L KD F+VTVYP++DYAFI +L+VILDD+N ++
Sbjct:   30 PKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNRED 214          
The following BLAST results are available for this feature:
BLAST of EY664635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5175_ARATH1.326e-6460.00UPF0706 protein At5g01750 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664635 ID=EY664635; Name=EY664635; organism=Citrus sinensis; type=EST; length=820bp
AACACACTGCAGACCAGATGCCACAGCAACCAAACCCACAGCAAATTCCA
CAGCAGCCAATTAATATTCCAGCGCCAACTCCAGCACCAACAATATATTC
CAATCCGGTTTCGGTAATCGGCCTCAGTATTGCCTTCCTTATCCCGTTGA
TCTATCCATCGTTAGAAAGTTTTTAACCCTCACCGATGGCAGGTTTGCTG
TCACTGATATCAATGACAATCTCATGTTCAAAGTGAAAGAAAAACTTATA
AGCCTCCATGACAAGCGGACTCTACTTGATCCTGCTGGCAACCCTATTGT
CACCATAACAGAGAAAGTTTTTTCCTTGCACGAGAAGCATTTTGTATTCA
GGGGGGCTAGCACAGACACTAAAGATCTTCTCTTTACTGTGGAAAGATCT
TCAGTGATCCAATTGAAGACCACTTTGAACGTCTACCTGGCAAGTAACAC
CAAACAAGATGTTTGCGATTTCAAGATCAAAGGCAGCTGGACTGAAAAAT
CTTGTGTTGGATATGCTGGAGAGTCAAACACAATTGTTGCCCAGATGCGC
AAAAAGACAACTGCGGGCAGTGTCTTGCTCAACAAGGACAGGTTCACTGT
GACAGTTTATCCCGACATAGACTATGCGTTTATAGTAGCCCTGATCGTGA
TCCTCGATGATATAAACGGTGATGAAGATACGAGTGAGATTATTTAGATT
TGAAATTGCTACTATAAAGGGAAAAATAGGGGGCCTGGTTGATGAATTCA
AGTAAAATGCTGGATCCGGGGCTTTGGTTTTCCTTGATTCAAAACCCCTT
GCAGTAGCCAATAAAAAAAA
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