CX672057

Overview
NameCX672057
Unique NameCX672057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672057_ssr154 microsatellite CX672057_ssr154:154..165. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5128 contig Csv1_Contig5128:1..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.971e-33
Identity = 72/208 (34.62%), Postives = 108/208 (51.92%), Query Frame = 2
Query:  206 INMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCFRIPKPLCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASK 817
            + +H   +G+GPAV   HGFPE WYSWR Q+  L+  GYR +A D++GYG++ APP +  Y                   Q   +GHDWG ++ WY  LF P+RV+A+ +++ PF P NP + PL + +A    DY +  FQEPG  E E  Q + +R  K          L + K      L    P+  +L   ++EE++ +Y  +
Sbjct:  248 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQL-YFQEPGVAEAELEQ-NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQ 453          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.602e-32
Identity = 72/209 (34.45%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  203 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCFRIPKPLCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASK 817
            G+ +H   +G+GPAV   HGFPE W+SWR Q+  L+  G+R +A D++GYG++ APP +  Y+                  Q   +GHDWG ++ W   LF P+RV+A+ +++ PF P NP V P+   +A    DY +  FQEPG  E E  Q +  R  K F        L   +   L  L    P+  +L   ++EED+ +Y  +
Sbjct:  247 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQL-YFQEPGVAEAELEQ-NLDRTFKNFFRAHDETFLTTNRVRELGGLFVGTPEEPSLSRLVTEEDIQFYVQQ 453          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.731e-30
Identity = 69/209 (33.01%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  203 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCFRIPKP---LCIPKDTGLSTL----PDPSALPSWLSEEDVNYY 808
            GI +H   +G+GPA+   HGFPE W+SWR Q+  L+  G+R +A D++GYGD+ +PP +  Y                   Q   +GHDW  ++ W   LF P+RV+A+ +++ P  P NP V P+   R++   +Y +  FQEPG  E E  + + +R  K F  FR       L + K T +  +    P+   +    +EE++ YY
Sbjct:  245 GIRLHFVEMGSGPAICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQL-YFQEPGVAEAELEK-NMSRTFKSF--FRTSDDMGLLTVNKATEMGGILVGTPEDPKVSKITTEEEIEYY 449          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.005e-29
Identity = 68/209 (32.54%), Postives = 109/209 (52.15%), Query Frame = 2
Query:  203 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCFRIPKP---LCIPKDTGLSTL----PDPSALPSWLSEEDVNYY 808
            GI +H   +G+GPA+   HGFPE W+SWR Q+  L+  G+R +A D++GYGD+ +PP +  Y                   Q   +GHDW  ++ W   LF P+RV+A+ +++ PF P +P V P+   R++   +Y +  FQEPG  E E  + + +R  K F  FR       + + K T +  +    P+   L    +EE++ +Y
Sbjct:  245 GIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQL-YFQEPGVAEAELEK-NMSRTFKSF--FRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFY 449          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.817e-25
Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 2
Query:  167 MEKIEHTTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMK 688
            M+ ++   V TNGI +HVA+ G   GP ++ +HGFPE WY W+NQ+  L   GYR IAPD RGY  +D P  + SY                   +  ++GHDWG  +AW+    RP+ ++ L+ +++P P     V PL  +   +    YI  FQ P   E    + D   L K
Sbjct:    1 MDGVKCQFVNTNGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPL--YPPQWLKSSYIAYFQLPDIPEASLRENDYDTLDK 174          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20
Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  197 TNGINMHVASIG--TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMS 541
            ++G+ +H  S G   GP +LF+HGFPE W+SWR QL    SR +  +A DLRGYG +DAP  V  YT                  +  LV HDWGAL+AW+F ++ P  V+ +V +S
Sbjct:   82 SSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSR-FHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVS 197          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.865e-18
Identity = 54/160 (33.75%), Postives = 78/160 (48.75%), Query Frame = 2
Query:  182 HTTVATNGINMHVASIGTG--PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP-------RNPAVRPLNNFRAVYGDDYYICRFQE 634
            +  +  +G+  H  + G    P +L +HGFPE WYSWR+QL    S  YR +A DLRGYG++DAP    SY                   +  L+GHDWG +IAW   +  P+ +  L+ ++ P P        R+PA      FR+ +   + I RF E
Sbjct:   71 YVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSE-YRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHPA----QLFRSSFYYFFQIPRFPE 225          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: EPHX4_HUMAN (Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.086e-18
Identity = 46/126 (36.51%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  182 HTTVATNGINMHVASIGTG--PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 553
            +  +  +G+  H  + G    P +L +HGFPE WYSWR QL    S  YR +A DLRGYG+TDAP    +Y                   +  L+GHDWG +IAW   +  P+ V  L+ ++ P P
Sbjct:   73 YVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSE-YRVVALDLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFPHP 197          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: EPHX3_XENTR (Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.209e-17
Identity = 48/120 (40.00%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  200 NGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 553
            +GI  H  + G    P +L +HGFPE WYSWR QL   S+ GYR +A DLRG+G +DAP  +  Y                   +  LVGHDWG  +AW F +   D V  L+ M+ P P
Sbjct:   83 SGIRFHYVASGDKRNPLMLLLHGFPENWYSWRYQLDEFSN-GYRTVAIDLRGFGGSDAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLIVMNAPHP 201          
BLAST of CX672057 vs. ExPASy Swiss-Prot
Match: EPHX3_MOUSE (Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  191 VATNGINMHVASIG--TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 547
            V ++G+ +H  S G   GP +LF+HGFPE W+SWR QL    S  +  +A D+RGY  +DAP  V  YT                  +  LV HDWGA +AW F ++ P  V+ +V  + P
Sbjct:   87 VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQLREFQSH-FHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMVVANGP 206          
The following BLAST results are available for this feature:
BLAST of CX672057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
HYES_HUMAN5.971e-3334.62Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
HYES_PIG6.602e-3234.45Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
HYES_RAT4.731e-3033.01Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE4.005e-2932.54Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
YFHM_BACSU7.817e-2534.66AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
EPHX3_HUMAN7.571e-2041.88Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 ... [more]
EPHX4_MOUSE1.865e-1833.75Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
EPHX4_HUMAN7.086e-1836.51Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 ... [more]
EPHX3_XENTR1.209e-1740.00Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3... [more]
EPHX3_MOUSE1.579e-1738.02Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14F10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14F10-K20-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672057 ID=CX672057; Name=CX672057; organism=Citrus sinensis; type=EST; length=819bp
ATTTGTCCGTCCTATTCTTCTTATCCATTTGATATTTAGCTCAATCATCA
ACCGGGAGTCCGGCAGGAGCCGTCCTGTTTCACGTTCCTTTCATTCAACT
TAAACAGAGCCTAATCCTGAAACCTTCAGATTTCAGAGTTGCACCAAAAG
GAAAAACAAACAAACAATGGAGAAAATAGAGCACACAACAGTAGCCACTA
ACGGCATAAACATGCACGTGGCATCAATAGGGACCGGCCCAGCAGTTCTC
TTCATTCACGGCTTCCCTGAACTCTGGTATTCCTGGCGCAACCAGCTCCT
CTATCTCTCTTCCCGCGGCTACCGTGCCATTGCCCCAGACCTTCGTGGAT
ACGGCGACACCGACGCCCCACCCTCGGTCACGTCGTACACGGCACTCCAT
CTTGTCGGTGACCTCATCGGCCTCCTTGATAAATTGGGTATCCATCAAGT
TTTCCTAGTGGGTCATGACTGGGGTGCTTTGATTGCTTGGTATTTTTGTT
TGTTTAGGCCGGACAGAGTCAAGGCCTTAGTCAACATGAGCGTCCCCTTT
CCTCCCAGAAACCCGGCTGTGAGACCTCTTAATAACTTCAGGGCTGTCTA
TGGTGATGATTATTATATCTGCAGATTTCAGGAACCTGGAGAGATTGAAG
AAGAGTTTGCTCAGATTGATACTGCAAGACTTATGAAGAAATTTCTGTGT
TTCCGCATTCCAAAACCACTTTGTATACCCAAAGATACAGGACTCAGTAC
TCTACCGGATCCTTCAGCCTTGCCCTCTTGGCTGTCAGAAGAAGATGTCA
ATTATTATGCCTCCAAATT
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