CX672056

Overview
NameCX672056
Unique NameCX672056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5128 contig Csv1_Contig5128:549..1469. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672056 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 52/189 (27.51%), Postives = 90/189 (47.62%), Query Frame = -3
Query:  362 PRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCFRIPKPLCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 916
            P NP V P+   +A    DY +  FQEPG  E E  Q +  R  K F        L   +   L  L    P+  +L   ++EED+ +Y  +F + GF GP+N+YR  + NW+     +G +I +P   +  + DLV + K +K        + ++P+L+   + +   H+   +K  E+   + E+++
Sbjct:  364 PSNPNVSPMEIIKANPVFDYQLY-FQEPGVAEAELEQ-NLDRTFKNFFRAHDETFLTTNRVRELGGLFVGTPEEPSLSRLVTEEDIQFYVQQFKKSGFRGPLNWYRNMERNWQWGCKGSGRKILIPALMVTAENDLVLHPKMSKH------MENWIPHLKRGHIKD-CGHWTQIDKPAELNRILIEWLE 543          
BLAST of CX672056 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12
Identity = 53/192 (27.60%), Postives = 93/192 (48.44%), Query Frame = -3
Query:  362 PRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCFRIPKP---LCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 916
            P NP V P+   R++   +Y +  FQEPG  E E  + + +R  K F  FR       L + K T +  +    P+   +    +EE++ YY  +F + GF GP+N+YR  + NW+      G +I VP   +  ++D+V   + +K        + ++P+L+   + E   H+   EK  EV   + +++K
Sbjct:  362 PPNPEVSPMEVIRSIPVFNYQLY-FQEPGVAEAELEK-NMSRTFKSF--FRTSDDMGLLTVNKATEMGGILVGTPEDPKVSKITTEEEIEYYIQQFKKSGFRGPLNWYRNTERNWKWSCKALGRKILVPALMVTAEKDIVLRPEMSK------NMENWIPFLKRGHI-EDCGHWTQIEKPAEVNQILIKWLK 542          
BLAST of CX672056 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11
Identity = 51/192 (26.56%), Postives = 94/192 (48.96%), Query Frame = -3
Query:  362 PRNPAVRPLNNFRAVYGDDYYICRFQEPGEIEEEFAQIDTARLMKKFLCFRIPKP---LCIPKDTGLSTL----PDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLNWELMAPWTGVQIKVPVKYIVGDQDLVYNNKGTKEYIHNGGFKKYVPYLQDVVVMEGVAHFINQEKAEEVGAHIYEFIK 916
            P +P V P+   R++   +Y +  FQEPG  E E  + + +R  K F  FR       + + K T +  +    P+   L    +EE++ +Y  +F + GF GP+N+YR  + NW+      G +I VP   +  ++D+V   + +K        +K++P+L+   + E   H+   EK  EV   + ++++
Sbjct:  362 PPDPDVSPMKVIRSIPVFNYQLY-FQEPGVAEAELEK-NMSRTFKSF--FRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNWYRNTERNWKWSCKGLGRKILVPALMVTAEKDIVLRPEMSK------NMEKWIPFLKRGHI-EDCGHWTQIEKPTEVNQILIKWLQ 542          
The following BLAST results are available for this feature:
BLAST of CX672056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
HYES_PIG1.825e-1227.51Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
HYES_RAT3.113e-1227.60Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE2.636e-1126.56Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_14F10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14F10-K20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672056 ID=CX672056; Name=CX672056; organism=Citrus sinensis; type=EST; length=921bp
TTTTTTTTTTTTTTTTTATAACCAATTCCGACAGATAAAACTGTAAGAAA
AAGATTTACTTACGACCAACATTTCAGTCTCGATGTTTGGTTAGACCGAA
GCCACACTCTGTTAATGGTATTATACATCTTCCATATATTCTCATTCGAG
TCCAAACGGACATATTCTTCATTTGTCTTAGATATGGCAAGTCCTACAAC
TACAACACATTTATTCAGAGACAAACAGAACAATACAAGATACATAGGCT
GGAGTAGGCCTAGACTGTTGGTATGGTGGAATTAATGAAACTTTAGATTG
TAACTCTTATGGAGATGCATGGCATGCTGAGATGGTCAATGCCAAAGCTC
CATCAGAACTTCTTGATGAACTCATAGATGTGTGCACCAACTTCTTCTGC
CTTTTCTTGGTTGATAAAGTGAGCTACCCCTTCCATGACAACTACATCCT
GCAGATATGGTACATATTTCTTGAAGCCACCATTGTGTATATATTCCTTC
GTACCTTTGTTGTTATAGACAAGATCCTGGTCACCCACGATATACTTGAC
TGGTACTTTGATTTGTACCCCAGTCCATGGCGCCATCAGCTCCCAATTTA
GATCCCAACATCGATAATAATTCACTGGTCCAGTGAAGCCTTTCTGGTTA
AATTTGGAGGCATAATAATTGACATCTTCTTCTGACAGCCAAGAGGGCAA
GGCTGAAGGATCCGGTAGAGTACTGAGTCCTGTATCTTTGGGTATACAAA
GTGGTTTTGGAATGCGGAAACACAGAAATTTCTTCATAAGTCTTGCAGTA
TCAATCTGAGCAAACTCTTCTTCAATCTCTCCAGGTTCCTGAAATCTGCA
GATATAATAATCATCACCATAGACAGCCCTGAAGTTATTAAGAGGTCTCA
CAGCCGGGTTTCTGGGAGGAA
back to top