CX672051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD_NICSY (Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 1.071e-89 Identity = 169/205 (82.44%), Postives = 177/205 (86.34%), Query Frame = 1 Query: 1 AATTQASLFAPANFSTTKSSAPWKQS-SSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 612 A TQASLF PA S KSSAPWKQS +SFS + LK I+AMAE + T EAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREG NLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPEKVN GR+GVGQN+RSIGKN SPIEVKFTGKQVYDL Sbjct: 2 AMATQASLFTPA-LSAPKSSAPWKQSLASFSPKQLKSTVSAPRPIRAMAE-EAATKEAEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGANLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDL 204
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD_CUCSA (Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.309e-87 Identity = 167/210 (79.52%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 1 AATTQASLFAPANFSTTKS---SAPWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 612 A TQA+LF P+ ST KS S PWKQSS+ S +P A + + K AE +T EAP GF+PPELDP+TPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQN+RSIGKNVSPIEVKFTGKQVYDL Sbjct: 2 AMATQATLFTPS-LSTPKSTGISIPWKQSSTLSFLTSKPHLKAASSSRSFKVSAEAETSV---EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 207
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD_SOLLC (Photosystem I reaction center subunit II, chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 2.916e-87 Identity = 165/207 (79.71%), Postives = 173/207 (83.57%), Query Frame = 1 Query: 1 AATTQASLFAPANFSTTKSSAPWKQSS-SFSV-RPLKHNAPRTNTIKAMAE-GKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 612 A TQASLF P ++APWKQS SFS + LK T I+AMAE T K AP GFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQN+RSIGKN S IEVKFTGKQVYD+ Sbjct: 2 AMATQASLFTPPLSVPKSTTAPWKQSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNKSAIEVKFTGKQVYDI 208
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD_SPIOL (Photosystem I reaction center subunit II, chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2) HSP 1 Score: 312.383 bits (799), Expect = 1.769e-84 Identity = 164/214 (76.64%), Postives = 180/214 (84.11%), Query Frame = 1 Query: 1 AATTQASLFAPANFST-----TKSSAPWKQSSS--FSVRPL-KHNAPRTNTIKAMAEGKTE--TPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 612 A TQA+LF+P++ S+ T+ + +KQ S+ F+ +P +H++ R A AEGK T TKEAP GFTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNPGR+GVG N RSIGKNVSPIEVKFTGKQ YDL Sbjct: 2 AMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRA---AAAAEGKAAAATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD2_ARATH (Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.831e-81 Identity = 156/204 (76.47%), Postives = 164/204 (80.39%), Query Frame = 1 Query: 4 ATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPT-KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 612 AT A +F+PA +TT S+ S S RP + +T E + P KEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGREGVG N RSIGKNVSPIEVKFTGKQ YDL Sbjct: 2 ATQAAGIFSPA-ITTTTSAVKKLHLFSSSHRPKSLSFTKTAIRAEKTESSSAAPAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSYDL 204
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD1_ARATH (Photosystem I reaction center subunit II-1, chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 2.238e-79 Identity = 156/209 (74.64%), Postives = 163/209 (77.99%), Query Frame = 1 Query: 4 ATTQASLFAPANFSTTKSSAPWKQSSSFSV--RP----LKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 612 AT A +F A TT +++ K+ FS RP A R + A TKEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGREGVG N RSIGKNVSPIEVKFTGKQ YDL Sbjct: 2 ATQAAGIFNSA--ITTAATSGVKKLHFFSTTHRPKSLSFTKTAIRAEKTDSSAAAAAAPATKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSYDL 208
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD_HORVU (Photosystem I reaction center subunit II, chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.367e-75 Identity = 132/150 (88.00%), Postives = 140/150 (93.33%), Query Frame = 1 Query: 163 PTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 612 P + AP GF PP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMREGPNLLKLARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVN GR+GVGQN+RSIGKNVSPIEVKFTGK +D+ Sbjct: 56 PAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNSFDI 205
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD_CHLRE (Photosystem I reaction center subunit II, chloroplastic OS=Chlamydomonas reinhardtii GN=psaD PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.081e-57 Identity = 115/186 (61.83%), Postives = 140/186 (75.27%), Query Frame = 1 Query: 49 TKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPV-GFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQV 603 T++ A + SS +V + A R ++A AE K A +T P L+P+TPSPIFGGSTGGLLRKAQ EEFYVITWE+ KEQIFEMPTGGAAIMR+GPNLLK +KEQCLAL T+LR+K+K+ FYRVFP+G+VQYLHP DGVYPEKVN GR G QN R IG+NV+PI+VKF+G+ + Sbjct: 7 TQAPAATRASSRVAVAA-RPAARRAVVVRAEAEAAPAAAKKAAEKPAWTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGKKEQCLALTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNMRRIGQNVNPIKVKFSGRMM 191
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD_CYAPA (Photosystem I reaction center subunit II, cyanelle OS=Cyanophora paradoxa GN=psaD PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.511e-51 Identity = 107/200 (53.50%), Postives = 134/200 (67.00%), Query Frame = 1 Query: 43 STTKSSAPWKQSSSF------SVRPLKHNAPRTNTIKAMAEGKTETPTKE----APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 609 S T SSA Q +F + + AP ++A E E AP F+ P L+ N P+PIFGGSTGGLLRKA+VEEFY ITW E +FE+PTGGAAIMR G NLL+LARKEQC+ALG +L+ K+KI Y+ YRV+P+GEVQ+LHPKDGV+PEKVNPGR VG N R IG+N P ++KF G++ +D Sbjct: 16 SATLSSAVCAQKKAFFGAQVAAKKTTFEAAPARFIVRAEEEEAAPAEKVEKKAAAPKPFSVPTLNLNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRAGENLLRLARKEQCIALGAQLKDKFKITDYKIYRVYPSGEVQFLHPKDGVFPEKVNPGRVAVGSNKRRIGQNPDPAKLKFKGQETFD 215
BLAST of CX672051 vs. ExPASy Swiss-Prot
Match: PSAD_GUITH (Photosystem I reaction center subunit II OS=Guillardia theta GN=psaD PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.564e-48 Identity = 93/137 (67.88%), Postives = 110/137 (80.29%), Query Frame = 1 Query: 202 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 609 L+ PSP F GSTGG LR A+ EE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL LARKEQCLALGT++++ +KI Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR GVG SIGKN++P ++KFT K D Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAETEEKYAITWTSPKEQVFEMPTGGAAIMRKGENLLYLARKEQCLALGTQVKTSFKITDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRIGVGNVSHSIGKNLNPAQIKFTNKSFCD 141 The following BLAST results are available for this feature:
BLAST of CX672051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672051 ID=CX672051; Name=CX672051; organism=Citrus sinensis; type=EST; length=771bpback to top |