CX672049

Overview
NameCX672049
Unique NameCX672049
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1386 contig Csv1_Contig1386:330..1043. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX672049 vs. ExPASy Swiss-Prot
Match: RPTOR_DICDI (Protein raptor homolog OS=Dictyostelium discoideum GN=raptor PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = -2 
Query:  519 APIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGFADACVSIH 713
            AP+IA GS  Q IK+ +  GE + TIRYH   F+ Q+IG V+C+ FHPY +L+ AG  D+ +SI+
Sbjct: 1434 APLIACGSQNQRIKIMNFTGEDVCTIRYHD-GFLGQRIGPVSCVAFHPYNILMGAGATDSIISIY 1497
The following BLAST results are available for this feature:
BLAST of CX672049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RPTOR_DICDI7.798e-1249.23Protein raptor homolog OS=Dictyostelium discoideum... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_14F06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14F06-K12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672049 ID=CX672049; Name=CX672049; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTTTTTTTTAATGGAAAGCCTAAGTTAAAGACCCCCGCATTT
CAGGGGATAATTACCCATATCACTCACTGTTTGCAACAAGTGTGCTGCTT
TTACAAATTGAACAAAAGGGATGGAAGAACAATGGACACGCCGAAATGGG
AGGAGAGATAAACAGGAGGGGTAAAAAGAAAAAAAAAACCTATTTACACA
CATTTACCTATATAACAAATTATTTGCCAAAGCACCCCTAATGTAGGATT
TCTTACCCAACATGTTAGAGACTCCACATTGGAGGCAAATGAATGTATAG
CATACAACTTCACTTTGAATTTCCCCGACCCCGTATTTCCAATTTATCAA
CAGTGAAGGACAACTGCGGCAGCAAAACGTGTGGCATTTCATGACTTGAA
TAAAGATGTGCATTGTTGACACGTTGGCCTGCCCTCAATTTGCTGCCTTC
CAAATTTGGGAATTTGAATCCAGTAAAAATAGTTCATTTCTTGCACGTGA
GTTGACATCAAATCAAGCATGTATAGAGACACAGGCATCTGCAAAACCGG
CAGCAAGAAGCACTTGGTATGGGTGGAAGGTGAGGCAATTTACAGAACCA
ATCTTCTGGGCCATGAAGCTCGGATGGTGGTATCTAATGGTGCCCAGTTG
TTCACCCTCCAAACTGAAAACTTTGATCAGCTGTTTTGCTGACCCACTGG
CAATGATTGGGGCA
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