EY664621

Overview
NameEY664621
Unique NameEY664621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC1_LOTJA (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus GN=RAC1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.623e-30
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  294 DTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            DTAG+EDY+RL P +YRGAD  +LA  LISK  YEN+ +    +L+H A G  +ILVGT LDLRDD+    DH
Sbjct:   60 DTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKHFLADH 132          

HSP 2 Score: 63.5438 bits (153), Expect = 1.623e-30
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 1
Query:  520 AVPIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTKNNK 678
            AVPI  A G++LRKLIGAPAYIE   K ++N  A +DA+I V L PPK K  K
Sbjct:  135 AVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQPPKQKKKK 187          

HSP 3 Score: 32.7278 bits (73), Expect = 1.623e-30
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:  166 GKLETVRTYTMNTFSTDYVPTGYEN 240
            GK   + +YT NTF TDYVPT ++N
Sbjct:   18 GKTCLLISYTSNTFPTDYVPTVFDN 42          

HSP 4 Score: 20.4014 bits (41), Expect = 1.623e-30
Identity = 10/15 (66.67%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  245 SANVEAYGRTVNRGL 289
            SANV   G TVN GL
Sbjct:   44 SANVVVDGSTVNLGL 58          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC5_ORYSJ (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.575e-27
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  132 IKCLTAGNRSAGKT*NGENLHHEHFLY*LCANWV*KFTAQMWKPMAELLIVDYVDTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            IKC+T G+ + GKT    +     F           F+A +       + +   DTAG+EDY+RL P +YRGAD  +LA  LISK  YENV +    +L+H A G  +ILVGT LDLRDD++ F+DH
Sbjct:    7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVD-GSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDH 132          

HSP 2 Score: 60.4622 bits (145), Expect = 2.575e-27
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  520 AVPIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTKNNK 678
            AVPI  A G++LRKLIGA AYIE   K ++N  A +DA+I V L PPK K  K
Sbjct:  135 AVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQPPKQKKKK 187          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC3_ARATH (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.365e-27
Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 3
Query:  132 IKCLTAGNRSAGKT*NGENLHHEHFLY*LCANWV*KFTAQMWKPMAELLIVDYVDTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            IKC+T G+ + GKT    +     F           F+A +       + +   DTAG+EDY+RL P +YRGAD  +LA  L+SK  YENV +    +L+H A G  +ILVGT LDLRDD++ F +H
Sbjct:    7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVD-GNTINLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEH 132          

HSP 2 Score: 63.1586 bits (152), Expect = 4.365e-27
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 1
Query:  520 AVPIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTKNNK 678
            AVPI  A G++L+KLIGAPAYIE   K ++N  A +DA+I V L PPK K  K
Sbjct:  135 AVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQPPKNKKKK 187          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC6_ORYSJ (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica GN=RAC6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.632e-26
Identity = 55/127 (43.31%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  132 IKCLTAGNRSAGKT*NGENLHHEHFLY*LCANWV*KFTAQMWKPMAELLIVDYVDTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            IKC+T G+ + GKT    +     F           F+A +       + +   DTAG+EDY+RL P +YRGAD  +LA  LISK  YENV +    +LKH A G  +ILVGT LDLRDD++ F+DH
Sbjct:    7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVD-GNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDH 132          

HSP 2 Score: 56.6102 bits (135), Expect = 1.632e-26
Identity = 29/56 (51.79%), Postives = 35/56 (62.50%), Query Frame = 1
Query:  520 AVPIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTKNNKIAR 687
            AVPI  A G++LRK IGAP YIE   K + N    +DA+I V L PPK K  K A+
Sbjct:  135 AVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVLQPPKAKKKKKAQ 190          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC5_ARATH (Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana GN=ARAC5 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.632e-26
Identity = 55/127 (43.31%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  132 IKCLTAGNRSAGKT*NGENLHHEHFLY*LCANWV*KFTAQMWKPMAELLIVDYVDTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            IKC+T G+ + GKT    +     F           F+A +       + +   DTAG+EDY+RL P +YRGAD  +LA  LISK  YENV +    +L+H A G  +ILVGT LDLRDD++ FIDH
Sbjct:    7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVD-GNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDH 132          

HSP 2 Score: 57.7658 bits (138), Expect = 1.632e-26
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 1
Query:  520 AVPIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTKNNKIARTR 693
            AVPI    G++L+KLIG+P YIE   K ++N  A +DA+I V L PPK K  K  + R
Sbjct:  135 AVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKKNKNR 192          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC4_ORYSJ (Rac-like GTP-binding protein 4 OS=Oryza sativa subsp. japonica GN=RAC4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.362e-26
Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 3
Query:  294 DTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDHHS 518
            DTAG+EDY+RL P +YRGAD  +LA  L+S+  YENV +    +L+H A G  ++LVGT LDLR+D+   +DH S
Sbjct:   62 DTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPELQHYAPGVPIVLVGTKLDLREDKHYLLDHPS 136          

HSP 2 Score: 50.8322 bits (120), Expect = 8.362e-26
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1
Query:  523 VPIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPP-KTKNNKIARTR 693
            VP+  A G++LRK IGA  YIE   K ++N  A +DA+I V + PP K ++ K  +TR
Sbjct:  138 VPVTTAQGEELRKHIGATCYIECSSKTQQNVKAVFDAAIKVVIKPPTKQRDRKKKKTR 195          

HSP 3 Score: 29.6462 bits (65), Expect = 8.362e-26
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:  166 GKLETVRTYTMNTFSTDYVPTGYEN 240
            GK   +  YT N F TDYVPT ++N
Sbjct:   20 GKTCMLICYTSNKFPTDYVPTVFDN 44          

HSP 4 Score: 20.4014 bits (41), Expect = 8.362e-26
Identity = 10/15 (66.67%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  245 SANVEAYGRTVNRGL 289
            SANV   G TVN GL
Sbjct:   46 SANVVVDGTTVNLGL 60          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC4_ARATH (Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana GN=ARAC4 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.034e-25
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  132 IKCLTAGNRSAGKT*NGENLHHEHFLY*LCANWV*KFTAQMWKPMAELLIVDYVDTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            IKC+T G+ + GKT    +     F           F+A +       + +   DTAG+EDY+RL P +YRGAD  +LA  LISK  YEN+ +    +L+H A G  +ILVGT LDLRDD++ FIDH
Sbjct:    6 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVD-GNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDH 131          

HSP 2 Score: 55.4546 bits (132), Expect = 1.034e-25
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 1
Query:  520 AVPIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTKNNKIARTRPA 699
            AVPI    G++L+KLIG+  YIE   K ++N  A +DA+I V L PPK K  K  + R A
Sbjct:  134 AVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKKNKNRCA 193          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC8_ARATH (Rac-like GTP-binding protein ARAC8 OS=Arabidopsis thaliana GN=ARAC8 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.984e-24
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 3
Query:  294 DTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            DTAG+EDY+RL P +YRGAD  +LA  LIS+  YENVF+    +L+H A G  ++LVGT +DLR+DR    DH
Sbjct:   62 DTAGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMDLREDRHYLSDH 134          

HSP 2 Score: 44.669 bits (104), Expect = 6.984e-24
Identity = 21/57 (36.84%), Postives = 33/57 (57.89%), Query Frame = 1
Query:  526 PIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTKNNKIARTRP 696
            P+  + G++LRK IGA  YIE   K ++N  A +DA+I V + P   +  K  + +P
Sbjct:  139 PVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVIKPAVKQKEKKKKQKP 195          

HSP 3 Score: 29.261 bits (64), Expect = 6.984e-24
Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:  166 GKLETVRTYTMNTFSTDYVPTGYEN 240
            GK   +  YT N F TDY+PT ++N
Sbjct:   20 GKTCMLICYTSNKFPTDYIPTVFDN 44          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC7_ORYSJ (Rac-like GTP-binding protein 7 OS=Oryza sativa subsp. japonica GN=RAC7 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.426e-23
Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 3
Query:  132 IKCLTAGNRSAGKT*NGENLHHEHFLY*LCANWV*KFTAQMWKPMAELLIVDYVDTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            IKC+T G+ + GKT    +     F           F+A +       + +   DTAG+EDY+RL P +YRGAD  +LA  LISK  YEN+ +    +L+H A    ++LVGT LDLR+D++ F+DH
Sbjct:    7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVD-GNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLDLREDKQFFLDH 132          

HSP 2 Score: 50.8322 bits (120), Expect = 4.426e-23
Identity = 23/56 (41.07%), Postives = 35/56 (62.50%), Query Frame = 1
Query:  526 PIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTKNNKIARTR 693
            PI  A G++L+++IGA AYIE   K ++N  + +D++I V L PPK K     + R
Sbjct:  137 PISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCPPKPKKKNTRKQR 192          
BLAST of EY664621 vs. ExPASy Swiss-Prot
Match: RAC2_ARATH (Rac-like GTP-binding protein ARAC2 OS=Arabidopsis thaliana GN=ARAC2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 9.746e-23
Identity = 52/127 (40.94%), Postives = 71/127 (55.91%), Query Frame = 3
Query:  132 IKCLTAGNRSAGKT*NGENLHHEHFLY*LCANWV*KFTAQMWKPMAELLIVDYVDTAGREDYDRL*P*NYRGADRHMLAVCLISKTKYENVFQNRH*DLKHGAHGETMILVGTLLDLRDDRRPFIDH 512
            IKC+T G+ + GKT    +     F           F+A +       + +   DTAG+EDY+RL P +YRGAD  +LA  LISK  YEN+ +    +LKH A G  ++LVGT LDLRDD++   DH
Sbjct:    7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVD-GSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRDDKQFLKDH 132          

HSP 2 Score: 49.2914 bits (116), Expect = 9.746e-23
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 1
Query:  520 AVPIHAAHGDDLRKLIGAPAYIE*QPKARENANAAYDASIAVDLHPPKTK 669
            A  I  A G++LRK+IGA  Y+E   K ++N  A +D +I V L PPK K
Sbjct:  135 AASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALRPPKAK 184          
The following BLAST results are available for this feature:
BLAST of EY664621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
RAC1_LOTJA1.623e-3056.16Rac-like GTP-binding protein RAC1 OS=Lotus japonic... [more]
RAC5_ORYSJ2.575e-2742.52Rac-like GTP-binding protein 5 OS=Oryza sativa sub... [more]
RAC3_ARATH4.365e-2740.94Rac-like GTP-binding protein ARAC3 OS=Arabidopsis ... [more]
RAC6_ORYSJ1.632e-2643.31Rac-like GTP-binding protein 6 OS=Oryza sativa sub... [more]
RAC5_ARATH1.632e-2643.31Rac-like GTP-binding protein ARAC5 OS=Arabidopsis ... [more]
RAC4_ORYSJ8.362e-2652.00Rac-like GTP-binding protein 4 OS=Oryza sativa sub... [more]
RAC4_ARATH1.034e-2542.52Rac-like GTP-binding protein ARAC4 OS=Arabidopsis ... [more]
RAC8_ARATH6.984e-2454.79Rac-like GTP-binding protein ARAC8 OS=Arabidopsis ... [more]
RAC7_ORYSJ4.426e-2339.37Rac-like GTP-binding protein 7 OS=Oryza sativa sub... [more]
RAC2_ARATH9.746e-2340.94Rac-like GTP-binding protein ARAC2 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664621 ID=EY664621; Name=EY664621; organism=Citrus sinensis; type=EST; length=939bp
AGCCAGTATCGGTCCGGNATTCCCGGCCCGACCCCGCGTCCGGGGTTGTT
TGTTCCTTTCTATGAGATGTATATTCTGGTCACTAATAAGCCGCTGACTT
AAAACAAATAGAATGGACCGCATGAACGTTGATTAAATGCCTGACCGCCG
GCAACCGATCTGCGGGGAAAACTTGAAACGGTGAGAACTTACACCATGAA
CACTTTCTCTACTGATTATGTGCCAACTGGGTATGAAAATTCACAGCGCA
AATGTGGAAGCCTATGGCAGAACTGTTAATCGTGGATTACGTGGACACTG
CCGGACGAGAGGATTATGACAGACTATGACCTTGAAATTACCGTGGTGCA
GATCGGCACATGCTCGCAGTCTGTCTTATTAGCAAAACAAAATATGAGAA
TGTATTCCAAAACAGACATTGAGACCTAAAACATGGTGCACATGGAGAGA
CAATGATCCTTGTTGGAACATTGCTTGATCTTCGGGATGATAGGCGGCCC
TTCATTGATCATCACAGCTGCCGTGCCCATTCATGCAGCTCATGGGGATG
ATCTGAGGAAGCTGATTGGCGCACCTGCGTACATTGAATGACAACCAAAA
GCACGGGAGAATGCGAACGCAGCCTATGATGCATCCATCGCAGTTGATCT
CCATCCTCCCAAGACGAAGAATAACAAGATAGCGCGCACCAGGCCTGCTC
TATATCGTGATCGCAATCATGAGGGAAGATATTATCACCCTCTGTACTTT
CTCATATACTGCCTCAGCTGTCGTCGTATCCTCCTAGAAAATCTCTATCG
ACAAACTGGCATGATCGCTCTGGCATCATCANGCTGGCTTGCATTGTCTN
CACGGAATCGGGGTGATCGGCTCTAACTGTTAGAATGCGTTCACTGTTGG
AAACAAATTAAAAAAGGACGCCGCTCTACAGATCAATCT
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