EY664613

Overview
NameEY664613
Unique NameEY664613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: CYB5_ORYSJ (Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = 3
Query:  462 SNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGXYGPQHATRVFDMIDDFYIG 692
            SN   K+Y+ +EV  HN +DDCW+II  KVY+V+ ++E+HPGG D +L+  G D+T+      H+T    M+D++Y+G
Sbjct:    2 SNDNKKVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYVG 79          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 3
Query:  477 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILAHA-GDDSTEGXYGPQHATRVFDMIDDFYIG 692
            KI++  EV  HN   DCW+II  KVYDVT ++E+HPGGD +L  A G D+T+      H++    M+D++Y+G
Sbjct:    3 KIFTLAEVAQHNNSKDCWLIINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVG 75          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 3
Query:  477 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGD-AILAHAGDDSTEGXYGPQHATRVFDMIDDFYIG 692
            K+ S +EV+ HNK  DCW+II  KVYDVT ++++HPGGD  +L+  G D+T       H+    DM+D ++IG
Sbjct:    6 KVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIG 78          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 30/74 (40.54%), Postives = 50/74 (67.57%), Query Frame = 3
Query:  474 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILAHA-GDDSTEGXYGPQHATRVFDMIDDFYIG 692
            +K+++  EV+ HN   DCW++I  KVYDVT ++++HPGGD +L  A G D+T+      H++    M+D++Y+G
Sbjct:    5 TKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVG 78          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  438 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGXYGPQHATRVFDMIDDFYIG 692
            K + SS   N A+K YS  EV  HN RD  WII+   VYD T ++++HPGG D+IL +AG D TE  +   H+ +   M++D+ IG
Sbjct:  503 KKSVSSPFMNTATKSYSLSEVRRHNNRDSAWIIVNGHVYDCTRFLKDHPGGEDSILLNAGTDCTE-EFEAIHSDKAKKMLEDYRIG 587          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: CYB5_PIG (Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 3
Query:  462 SNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAIL-AHAGDDSTEGXYGPQHATRVFDMIDDFYIGGSEMHITCSQRVVKLQQTL 749
            S+KA K Y+ +E+  HN     W+I+ +KVYD+T ++EEHPGG+ +L   AG D+TE      H+T   ++   F IG  E+H     ++ K  +TL
Sbjct:    5 SDKAVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIG--ELHPDDRSKIAKPSETL 99          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 3
Query:  477 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGD-AILAHAGDDSTEGXYGPQHATRVFDMIDDFYIG 692
            K+   +EV+ HNK  DCW+II  KVYDVT ++++HPGGD  +L+  G D+T       H+    DM++ +YIG
Sbjct:    6 KVLGFEEVSQHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIG 78          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  438 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGXYGPQHATRVFDMIDDFYIG 692
            K + S+   N ASK+YS  EV  HN  D  WII+   VYD T ++++HPGG D+IL +AG D TE  +   H+ +   +++DF IG
Sbjct:  523 KKSISTPFMNTASKMYSMSEVKKHNSADSAWIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTE-EFDAIHSDKAKKLLEDFRIG 607          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 30/74 (40.54%), Postives = 50/74 (67.57%), Query Frame = 3
Query:  474 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGXYGPQHATRVFDMIDDFYIG 692
            +KI++  EV+ HN+  DCWI+I  KVY+VT ++E+HPGG D +L+  G D+T+      H+    +M++ +Y+G
Sbjct:    5 AKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVG 78          
BLAST of EY664613 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 3
Query:  438 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGXYGPQHATRVFDMIDDFYIGGSEMHITC 716
            K + SS   N  SK Y+  EV  HN  D  WII+   VYD T ++++HPGG D+IL +AG D TE  +   H+ +   M++D+ IG  E+  TC
Sbjct:  505 KKSVSSPFMNTTSKTYTMSEVRRHNNADSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTE-EFEAIHSDKAKQMLEDYRIG--ELTTTC 595          
The following BLAST results are available for this feature:
BLAST of EY664613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
CYB5_ORYSJ1.349e-1443.59Cytochrome b5 OS=Oryza sativa subsp. japonica GN=O... [more]
CYB5_BOROF9.666e-1345.21Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB51_ARATH9.666e-1345.21Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
CYB5_TOBAC1.262e-1240.54Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
NIA1_PHAVU2.812e-1244.19Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
CYB5_PIG2.812e-1238.14Cytochrome b5 OS=Sus scrofa GN=CYB5A PE=1 SV=3[more]
CYB5_BRAOB2.812e-1243.84Cytochrome b5 OS=Brassica oleracea var. botrytis G... [more]
NIA_PETHY3.673e-1243.02Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
CYB52_ARATH3.673e-1240.54Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
NIA2_SOYBN6.265e-1241.49Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664613 ID=EY664613; Name=EY664613; organism=Citrus sinensis; type=EST; length=861bp
CCACGCGTCCGGTCTTCAGTATGGAGTCGATTAAGTCCACTATCAAGTTG
AATATCTTGGCGAATAAGTCCAGTAGTCGAATATAAGGTCGAGAAAGTGG
AGTAAGTCAAGGACGAGGTTAAGGAGTTGAATACGAAGTCAAGTGCAAGA
TCGAGAAAGCCAAGTAGCAGTAGATGTAGCGGCCTATAACCAAGTGAAAA
CAAATAACACCGCGGCTGTGCCGGAGAGGGAATACTAACAGAAGTAAAAT
CTATCCGGCAAATCCGATTCGAATCTCTCTACTTAATCTGATCCATTGCT
GTTTTTATAATTCACAGAGCACGTAGCAGCTGGGTAGTGGATTTTGAAAG
ATGGTTATAATCGTGGCCGCATTAATTTTAGGTGCCATTTTGGGAGTCTT
TATTTTCATCCCACGACACCCTGCATCTGGCCATTCAAAAAGTACTCGCT
CAAGTGCTAACAGTAACAAGGCATCAAAAATCTACAGCAAAGATGAAGTA
ACATTGCATAATAAGAGAGATGACTGTTGGATCATTATCAAGAACAAGGT
GTATGATGTTACCTCATATGTAGAGGAACACCCAGGTGGCGATGCTATCC
TAGCACATGCTGGTGATGATTCAACTGAAGGATNNTATGGGCCACAGCAT
GCAACCCGAGTCTTTGACATGATAGATGACTTTTACATTGGGGGATCTGA
AATGCATATCACTTGCAGCCAACGAGTTGTAAAATTACAACAGACTCTGG
ACTTNCATGTTTTATTCTTCCATTGGCTTTTTTTTGCCTAAACTTGACAC
CTTTTGTGGCCATTTACATTTTAAGAGAATCTTTCCTTTTCTTTTAAAAA
AAAAAAAAAAA
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