CX672015

Overview
NameCX672015
Unique NameCX672015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD_ARATH (AMP deaminase OS=Arabidopsis thaliana GN=AMPD PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 2.573e-64
Identity = 114/141 (80.85%), Postives = 127/141 (90.07%), Query Frame = -1
Query:  332 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEI 754
            LAQIGLAMSPLSNNSLFLDYHRNPFP+FF RGLNVSLS+DDPLQIHLTKE LVEEYS+AA VWKLS+CDLCEIARNSVYQSGFSH  KSHW+G  ++ RGP+GNDIHKTNVP+IR+EFR   WKEEMQ VYLG+A+I  E+
Sbjct:  697 LAQIGLAMSPLSNNSLFLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALKSHWIGKDYYKRGPDGNDIHKTNVPHIRVEFRDTIWKEEMQQVYLGKAVISDEV 837          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD_ORYSJ (Probable AMP deaminase OS=Oryza sativa subsp. japonica GN=AMPD PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.108e-62
Identity = 111/142 (78.17%), Postives = 124/142 (87.32%), Query Frame = -1
Query:  329 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIPVEID 754
            LAQIGLAMSPLSNNSLF+DYHRNPFP FF RGLNVSLS+DDPLQIHLTKE LVEEYS+AA +WKLSSCDLCEIARNSVYQSGFSH  KSHW+G  ++ RG +GNDIH+TNVP+IRIEFRH  WKEEM+ ++L    IP EID
Sbjct:  673 LAQIGLAMSPLSNNSLFIDYHRNPFPTFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASLWKLSSCDLCEIARNSVYQSGFSHRLKSHWIGRNYYKRGHDGNDIHQTNVPHIRIEFRHTIWKEEMELIHLRNVDIPEEID 814          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD2_RAT (AMP deaminase 2 OS=Rattus norvegicus GN=Ampd2 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 3.376e-48
Identity = 88/130 (67.69%), Postives = 105/130 (80.77%), Query Frame = -1
Query:  365 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYV 754
            LAQIG+AMSPLSNNSLFL YHRNP P +  RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+ARNSV  SGFSH  KSHWLG  +   GPEGNDI +TNVP+IR+ +R+ET  +E+  +
Sbjct:  671 LAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGPNYTKEGPEGNDIRRTNVPDIRVGYRYETLCQELALI 800          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD2_MOUSE (AMP deaminase 2 OS=Mus musculus GN=Ampd2 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.376e-48
Identity = 88/130 (67.69%), Postives = 105/130 (80.77%), Query Frame = -1
Query:  365 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYV 754
            LAQIG+AMSPLSNNSLFL YHRNP P +  RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+ARNSV  SGFSH  KSHWLG  +   GPEGNDI +TNVP+IR+ +R+ET  +E+  +
Sbjct:  645 LAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGPNYTKEGPEGNDIRRTNVPDIRVGYRYETLCQELALI 774          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD2_HUMAN (AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 3.376e-48
Identity = 88/130 (67.69%), Postives = 105/130 (80.77%), Query Frame = -1
Query:  365 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYV 754
            LAQIG+AMSPLSNNSLFL YHRNP P +  RGL VSLS+DDPLQ H TKE L+EEYS+A +VWKLSSCD+CE+ARNSV  SGFSH  KSHWLG  +   GPEGNDI +TNVP+IR+ +R+ET  +E+  +
Sbjct:  725 LAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGPNYTKEGPEGNDIRRTNVPDIRVGYRYETLCQELALI 854          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD_DICDI (AMP deaminase OS=Dictyostelium discoideum GN=amdA PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.563e-45
Identity = 88/138 (63.77%), Postives = 105/138 (76.09%), Query Frame = -1
Query:  341 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYVYLGRAIIP 754
            L QIG+AMSPLSNNSLFL Y+RNPFP FF RGLNVS+S+DDPLQ H TKE L+EEYS+A +VW+LS CD+CEIARNSV QSGF H  KSHWLG  +   G  GNDI KTN+ +IR+ FR+ET  EE+  +      +P
Sbjct:  526 LTQIGIAMSPLSNNSLFLTYNRNPFPAFFARGLNVSISTDDPLQFHYTKEPLMEEYSIATQVWRLSVCDICEIARNSVLQSGFEHNVKSHWLGPDYANSG--GNDIKKTNISDIRVCFRNETLIEELHLILKSLQTLP 661          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD3_RAT (AMP deaminase 3 OS=Rattus norvegicus GN=Ampd3 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.468e-43
Identity = 83/130 (63.85%), Postives = 103/130 (79.23%), Query Frame = -1
Query:  365 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYV 754
            LAQI +AMSPLSNNSLFL+Y +NP   F  +GL+VSLS+DDP+Q H TKEAL+EEY++AA+VWKLS+CDLCEIARNSV QSG SH  K  +LG  ++  GPEGNDI KTNV  IR+ FR+ET   E+ ++
Sbjct:  622 LAQIPIAMSPLSNNSLFLEYSKNPLREFLHKGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYYKEGPEGNDIRKTNVAQIRMAFRYETLCNELSFL 751          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD3_HUMAN (AMP deaminase 3 OS=Homo sapiens GN=AMPD3 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.468e-43
Identity = 83/130 (63.85%), Postives = 103/130 (79.23%), Query Frame = -1
Query:  365 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYV 754
            LAQI +AMSPLSNNSLFL+Y +NP   F  +GL+VSLS+DDP+Q H TKEAL+EEY++AA+VWKLS+CDLCEIARNSV QSG SH  K  +LG  ++  GPEGNDI KTNV  IR+ FR+ET   E+ ++
Sbjct:  624 LAQIPIAMSPLSNNSLFLEYSKNPLREFLHKGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYYKEGPEGNDIRKTNVAQIRMAFRYETLCNELSFL 753          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD3_MOUSE (AMP deaminase 3 OS=Mus musculus GN=Ampd3 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.285e-43
Identity = 82/130 (63.08%), Postives = 102/130 (78.46%), Query Frame = -1
Query:  365 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYV 754
            LAQI +AMSPLSNNSLFL+Y + P   F  +GL+VSLS+DDP+Q H TKEAL+EEY++AA+VWKLS+CDLCEIARNSV QSG SH  K  +LG  ++  GPEGNDI KTNV  IR+ FR+ET   E+ ++
Sbjct:  623 LAQIPIAMSPLSNNSLFLEYSKKPLREFLHKGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYYKEGPEGNDIRKTNVAQIRMAFRYETLCNELSFL 752          
BLAST of CX672015 vs. ExPASy Swiss-Prot
Match: AMPD_YEAST (AMP deaminase OS=Saccharomyces cerevisiae GN=AMD1 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.374e-41
Identity = 78/130 (60.00%), Postives = 103/130 (79.23%), Query Frame = -1
Query:  365 LAQIGLAMSPLSNNSLFLDYHRNPFPMFFQRGLNVSLSSDDPLQIHLTKEALVEEYSVAAKVWKLSSCDLCEIARNSVYQSGFSHMAKSHWLGNKFFIRGPEGNDIHKTNVPNIRIEFRHETWKEEMQYV 754
            L Q+G+AMSPLSNN+LFL Y +NPFP +F+RGLNVSLS+DDPLQ   T+E L+EEYSVAA+++KLS+ D+CE+ARNSV QSG+    K HW+G  F   G EGND+ +TNVP+IRI +R++T   E++ V
Sbjct:  668 LDQVGIAMSPLSNNALFLTYDKNPFPRYFKRGLNVSLSTDDPLQFSYTREPLIEEYSVAAQIYKLSNVDMCELARNSVLQSGWEAQIKKHWIGKDFDKSGVEGNDVVRTNVPDIRINYRYDTLSTELELV 797          
The following BLAST results are available for this feature:
BLAST of CX672015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AMPD_ARATH2.573e-6480.85AMP deaminase OS=Arabidopsis thaliana GN=AMPD PE=1... [more]
AMPD_ORYSJ4.108e-6278.17Probable AMP deaminase OS=Oryza sativa subsp. japo... [more]
AMPD2_RAT3.376e-4867.69AMP deaminase 2 OS=Rattus norvegicus GN=Ampd2 PE=2... [more]
AMPD2_MOUSE3.376e-4867.69AMP deaminase 2 OS=Mus musculus GN=Ampd2 PE=1 SV=1[more]
AMPD2_HUMAN3.376e-4867.69AMP deaminase 2 OS=Homo sapiens GN=AMPD2 PE=1 SV=2[more]
AMPD_DICDI4.563e-4563.77AMP deaminase OS=Dictyostelium discoideum GN=amdA ... [more]
AMPD3_RAT1.468e-4363.85AMP deaminase 3 OS=Rattus norvegicus GN=Ampd3 PE=2... [more]
AMPD3_HUMAN1.468e-4363.85AMP deaminase 3 OS=Homo sapiens GN=AMPD3 PE=1 SV=1[more]
AMPD3_MOUSE7.285e-4363.08AMP deaminase 3 OS=Mus musculus GN=Ampd3 PE=2 SV=1[more]
AMPD_YEAST1.374e-4160.00AMP deaminase OS=Saccharomyces cerevisiae GN=AMD1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E01-I2-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672015 ID=CX672015; Name=CX672015; organism=Citrus sinensis; type=EST; length=754bp
TTTTTTTTGTTAGCACTACAAAGAGCTTATATTCACTAGGCAGCCTTGCT
GCAACTTAAAGCTTCAGATTCCATTTCCAAAAGAAAATATACCAATACCC
CCATTCAGCTTGACCATAATTGGAATTAAAATACACAAAATAAATCTAAA
AGGGTTAGTTCTTCCCCCATATGCTACTGAAAAGCAAACTGCCGGTTCCT
AATGAGCTCTACCCACTGATTGAAGTTACTAAATTATTGAGGGTTATTAG
TAGATCTGACCATTCAGTAGGAGTAAGTCCCCGCTAAGCTCAAAAATGCT
TTATTCTCCCATTTCAATTCCATCAGGTGTCTATTTCTACAGGAATAATG
GCCCTTCCCAAGTAGACATACTGCATCTCTTCCTTCCATGTCTCATGTCG
AAACTCAATTCTTATATTCGGTACATTCGTCTTATGAATATCATTTCCTT
CTGGGCCTCTGATGAAGAATTTATTACCAAGCCAGTGTGACTTTGCCATA
TGCGAAAATCCTGATTGATAAACAGAATTTCTTGCTATCTCACATAGGTC
ACAAGAACTGAGCTTCCACACCTTTGCCGCAACACTATACTCTTCCACAA
GTGCTTCTTTTGTTAAGTGGATTTGCAAAGGATCATCAGACGAGAGTGAA
ACATTCAGGCCGCGCTGGAAGAACATAGGAAACGGATTTCGATGATAATC
CAGGAAAAGAGAATTATTGCTCAGTGGTGACATTGCCAATCCAATCTGAG
CGAG
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