CX672008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672008 vs. ExPASy Swiss-Prot
Match: MNMA_BORGA (tRNA-specific 2-thiouridylase mnmA OS=Borrelia garinii GN=mnmA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15 Identity = 47/130 (36.15%), Postives = 74/130 (56.92%), Query Frame = -1 Query: 424 LGTIPKEEVRKLATKFDLRNKDKKDSWGICFLGKIKFSEFVARHIG*WKVSYWKLRQGTSLKNIGDFGSTQL--VNTKN*VSLEDPEGYVVEKDIENNIVFVSRNYYSFDKKRHLFHAGSLKLLSGLPPE 807 LGT+ K EVR++A +L NKD+KDS GICFLGKIK++EF+ H+G K + + G K IG V + + L + +V+EKD+E NI+++S N + + F + ++G+P + Sbjct: 166 LGTLFKSEVRQIAKSINLPNKDRKDSQGICFLGKIKYNEFIKYHLGEKKGNIVEKETG---KIIGIHNGYWFFTVGQRRGIKLSNGPWFVIEKDLEKNIIYISHNENYLKQAKRKFLVHEIHWINGMPSD 292
BLAST of CX672008 vs. ExPASy Swiss-Prot
Match: MNMA_BORT9 (tRNA-specific 2-thiouridylase mnmA OS=Borrelia turicatae (strain 91E135) GN=mnmA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.508e-15 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = -1 Query: 463 LGTIPKEEVRKLATKFDLRNKDKKDSWGICFLGKIKFSEFVARHIG*WKVSYWKLRQGTSLKNIGDFGSTQLVNTKN*VSLEDPEGYVVEKDIENNIVFVSR--NYYSFDKKRHLFH 807 LG + K E+R++A K DL NK++KDS GICFLGKIK+ EF+ H+G K + + G L + + K + L +V EKDI+NNI+++S NY K++ L H Sbjct: 166 LGDLLKTEIRQIAQKIDLPNKNRKDSQGICFLGKIKYDEFIKYHLGELKGNIIEQETGKILGTHNGYWFFTIGQRKG-IKLSHGPWFVTEKDIQNNIIYISNSINYLKQGKQQFLVH 281
BLAST of CX672008 vs. ExPASy Swiss-Prot
Match: MNMA_BORBZ (tRNA-specific 2-thiouridylase mnmA OS=Borrelia burgdorferi (strain ZS7) GN=mnmA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.508e-15 Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = -1 Query: 463 LGTIPKEEVRKLATKFDLRNKDKKDSWGICFLGKIKFSEFVARHIG*WKVSYWKLRQGTSLKNIGDFGSTQL--VNTKN*VSLEDPEGYVVEKDIENNIVFVS--RNYYSFDKKRHLFH 807 LGT+ K EVR++A +L NKD+KDS GICFLGKIK++EF+ H+G K + + G K IG V + + L + +V+EKD+E NI+++S NY K++ L H Sbjct: 166 LGTLLKSEVRQIAKNINLPNKDRKDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETG---KIIGIHNGYWFFTVGQRRGIKLSNGPWFVIEKDLEKNIIYISHNENYLKQAKRKFLVH 281
BLAST of CX672008 vs. ExPASy Swiss-Prot
Match: MNMA_BORBU (tRNA-specific 2-thiouridylase mnmA OS=Borrelia burgdorferi GN=mnmA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.508e-15 Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = -1 Query: 463 LGTIPKEEVRKLATKFDLRNKDKKDSWGICFLGKIKFSEFVARHIG*WKVSYWKLRQGTSLKNIGDFGSTQL--VNTKN*VSLEDPEGYVVEKDIENNIVFVS--RNYYSFDKKRHLFH 807 LGT+ K EVR++A +L NKD+KDS GICFLGKIK++EF+ H+G K + + G K IG V + + L + +V+EKD+E NI+++S NY K++ L H Sbjct: 166 LGTLLKSEVRQIAKNINLPNKDRKDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETG---KIIGIHNGYWFFTVGQRRGIKLSNGPWFVIEKDLEKNIIYISHNENYLKQAKRKFLVH 281
BLAST of CX672008 vs. ExPASy Swiss-Prot
Match: MNMA_BORHD (tRNA-specific 2-thiouridylase mnmA OS=Borrelia hermsii (strain DAH) GN=mnmA PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.395e-15 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = -1 Query: 463 LGTIPKEEVRKLATKFDLRNKDKKDSWGICFLGKIKFSEFVARHIG*WKVSYWKLRQGTSLKNIGDFGSTQLVNTKN*VSLEDPEGYVVEKDIENNIVFVSR--NYYSFDKKRHLFH 807 LG + K E+R++A K DL NK++KDS GICFLGKIK+ EF+ H+G K + + G L + + K + L +V EKDI+NNI+++S NY + K + L H Sbjct: 166 LGDLLKTEIRQIAHKIDLPNKNRKDSQGICFLGKIKYDEFIKYHLGELKGNIIEQETGKILGTHNGYWFFTIGQRKG-IKLSHGPWFVTEKDIQNNIIYISNSVNYLAQGKHQFLVH 281
BLAST of CX672008 vs. ExPASy Swiss-Prot
Match: MNMA_BORAP (tRNA-specific 2-thiouridylase mnmA OS=Borrelia afzelii (strain PKo) GN=mnmA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.395e-15 Identity = 49/132 (37.12%), Postives = 76/132 (57.58%), Query Frame = -1 Query: 424 LGTIPKEEVRKLATKFDLRNKDKKDSWGICFLGKIKFSEFVARHIG*WKVSYWKLRQGTSLKNIGDFGSTQL--VNTKN*VSLEDPEGYVVEKDIENNIVFVS--RNYYSFDKKRHLFHAGSLKLLSGLPPE 807 LGT+ K EVR++A +L NK++KDS GICFLGKIK++EF+ H+G K + + G K IG V + + L + +V+EKD+E NI+++S NY K++ L H + ++G P + Sbjct: 166 LGTLLKSEVRQIAKNINLPNKNRKDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETG---KIIGTHNGYWFFTVGQRRGIKLSNGPWFVIEKDLEKNIIYISHNENYSKQAKRKFLVH--EIHWINGTPSD 292
BLAST of CX672008 vs. ExPASy Swiss-Prot
Match: MNMA_BORRA (tRNA-specific 2-thiouridylase mnmA OS=Borrelia recurrentis (strain A1) GN=mnmA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.227e-14 Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = -1 Query: 463 LGTIPKEEVRKLATKFDLRNKDKKDSWGICFLGKIKFSEFVARHIG*WKVSYWKLRQGTSLKNIGDFGSTQLVNTKN*VSLEDPEGYVVEKDIENNIVFVSR--NYYSFDKKRHLFH 807 LG + K E+R++A + DL NK++KDS GICFLGKIK++EF+ H+G K + + G L + + K + L +V EKDI+NNI+++S NY K++ L H Sbjct: 166 LGDLLKSEIRQIAHEIDLPNKNRKDSQGICFLGKIKYNEFIKYHLGELKGNIIEQETGKILGTHNGYWFFTIGQRKG-IKLSHGPWFVTEKDIQNNIIYISNSTNYLKQGKEQFLVH 281
BLAST of CX672008 vs. ExPASy Swiss-Prot
Match: MNMA_BORDL (tRNA-specific 2-thiouridylase mnmA OS=Borrelia duttonii (strain Ly) GN=mnmA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.227e-14 Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = -1 Query: 463 LGTIPKEEVRKLATKFDLRNKDKKDSWGICFLGKIKFSEFVARHIG*WKVSYWKLRQGTSLKNIGDFGSTQLVNTKN*VSLEDPEGYVVEKDIENNIVFVSR--NYYSFDKKRHLFH 807 LG + K E+R++A + DL NK++KDS GICFLGKIK++EF+ H+G K + + G L + + K + L +V EKDI+NNI+++S NY K++ L H Sbjct: 166 LGDLLKSEIRQIAHEIDLPNKNRKDSQGICFLGKIKYNEFIKYHLGELKGNIIEQETGKILGTHNGYWFFTIGQRKG-IKLSHGPWFVTEKDIQNNIIYISNSTNYLKQGKEQFLVH 281 The following BLAST results are available for this feature:
BLAST of CX672008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672008 ID=CX672008; Name=CX672008; organism=Citrus sinensis; type=EST; length=807bpback to top |