CX671993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 9.572e-52 Identity = 94/160 (58.75%), Postives = 131/160 (81.88%), Query Frame = -3 Query: 2 LPLPFRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFEN--GMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 475 LPLPFRD E+YS+E++++ ++ +MA+AL + P ++E+LF++ +Q+ RMNYYPPC QP++V+G H D+ LTVL+Q+N+++GLQIKKDGKWV VKPLP+AF+VNIGDVLEI+TNGTY SIEHR VNS KERLS+ATF+++ + E+GPA SL+ Sbjct: 163 LPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLV 322
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.651e-28 Identity = 64/157 (40.76%), Postives = 96/157 (61.15%), Query Frame = -3 Query: 2 PLPFRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 472 P FR+ E YS E++ + + + MAK L ++ + + P + +G + H DA+ LT+L+Q+NE++GL IKKD KWV +KP+ AFVVNIGDV+EI++NG Y SIEHRA +N+ KERLS+A F+ + ++GP L+ Sbjct: 162 PTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNR-EDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLV 317
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.259e-27 Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = -3 Query: 2 WEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 451 ++ Y+ + L+LKI++ + +L ++ +E FE+ FR+NYYP C QPE +G HCD ++LT+L Q +++ GLQ+ D KW ++ P P AFVVNIGD LTNG Y S HRA VNS +ER + A F K + + P L+ Sbjct: 186 YQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQ-DQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELV 334
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.805e-27 Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = -3 Query: 8 WEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATS 451 ++ Y E+K L+L I++ + +L ++ E F + R NYYPPC +PE+ +G HCD +ALT+LLQ +++ GL++ DG+W V P+P A V+NIGD L+NG Y S HRA VN +ER SLA F + D + P S Sbjct: 189 YQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPS 335
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.805e-27 Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = -3 Query: 8 WEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATS 451 ++ Y E+K L+L I++ + +L ++ E F + R NYYPPC +PE+ +G HCD +ALT+LLQ +++ GL++ DG+W V P+P A V+NIGD L+NG Y S HRA VN +ER SLA F + D + P S Sbjct: 189 YQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPS 335
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 8.160e-27 Identity = 61/155 (39.35%), Postives = 92/155 (59.35%), Query Frame = -3 Query: 2 PFRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 466 PF ++ Y + +L+LKI++ + +L + + E FE R+NYYPPC++P+ +G HCD ++LT+L Q + ++GLQ+ + +W +++P P AFVVNIGD L+N Y S HRA VNS ER SLA F K D + P L+ Sbjct: 182 PFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQ-DHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELL 335
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.818e-26 Identity = 59/147 (40.14%), Postives = 89/147 (60.54%), Query Frame = -3 Query: 2 YSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 442 Y +E+ L+L+I++ + ++L + FE R+NYYPPC +P + +G HCD ++LT+L Q N + GLQ+ +G+W +++P DAFVVNIGD L+NG Y S HRA VNS R SLA F ++D + P +L+ Sbjct: 167 YCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLV 312
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.101e-26 Identity = 59/147 (40.14%), Postives = 89/147 (60.54%), Query Frame = -3 Query: 2 YSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 442 Y +E+ L+L+I++ + ++L + FE R+NYYPPC +P + +G HCD ++LT+L Q N + GLQ+ +G+W +++P DAFVVNIGD L+NG Y S HRA VNS R SLA F ++D + P +L+ Sbjct: 167 YCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLV 312
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.101e-26 Identity = 59/147 (40.14%), Postives = 89/147 (60.54%), Query Frame = -3 Query: 2 YSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 442 Y +E+ L+L+I++ + ++L + FE R+NYYPPC +P + +G HCD ++LT+L Q N + GLQ+ +G+W +++P DAFVVNIGD L+NG Y S HRA VNS R SLA F ++D + P +L+ Sbjct: 167 YCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLV 312
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.478e-25 Identity = 55/158 (34.81%), Postives = 99/158 (62.66%), Query Frame = -3 Query: 2 RDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAF--RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 460 R + ++ E++NL ++LD + + L ++ ++++F +G+ F +++ YPPC +PE + G +H DA + +L Q +++ GLQ+ KDG+W+ V P+ + VVNIGD LE++TNG Y S+ HR + R+S+A+FY+ D + PA +L+ Sbjct: 113 RSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALV 270 The following BLAST results are available for this feature:
BLAST of CX671993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671993 ID=CX671993; Name=CX671993; organism=Citrus sinensis; type=EST; length=477bpback to top |