EY664599

Overview
NameEY664599
Unique NameEY664599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2578 contig Csv1_Contig2578:94..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664599 vs. ExPASy Swiss-Prot
Match: AGD11_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.163e-30
Identity = 64/81 (79.01%), Postives = 74/81 (91.36%), Query Frame = 1
Query:   13 FMGDAEIDIQPLVTAARACETSNINESMQLGKWVAGKDNTLVNDGIITLVDGKVKQEINLRLQNVERGVLEIELECVPLTQ 255
            FMG+AEIDIQPLV+AA+A ETS+I E MQLG WVA K+NTLV+DGII L DGKVKQ+I+LRLQNVERGVLEI+LEC+PLTQ
Sbjct:  305 FMGEAEIDIQPLVSAAKAYETSSIKEPMQLGSWVASKENTLVSDGIILLEDGKVKQDISLRLQNVERGVLEIQLECLPLTQ 385          
BLAST of EY664599 vs. ExPASy Swiss-Prot
Match: AGD13_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis thaliana GN=AGD13 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.335e-19
Identity = 44/80 (55.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query:   16 MGDAEIDIQPLVTAARACETSNINESMQLGKWVAGKDNTLVNDGIITLVDGKVKQEINLRLQNVERGVLEIELECVPLTQ 255
            MG+A+IDIQPL+T+A A     +   MQ+GKW+   DN L++D II +VDGKVKQE+ ++LQNVE G LE+E+E +PL Q
Sbjct:  257 MGEADIDIQPLITSAMAFGDPEMFGDMQIGKWLKSHDNPLIDDSIINIVDGKVKQEVQIKLQNVESGELELEMEWLPLDQ 336          
BLAST of EY664599 vs. ExPASy Swiss-Prot
Match: AGD12_ARATH (ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana GN=AGD12 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.355e-19
Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = 1
Query:   16 MGDAEIDIQPLVTAARACETSNINESMQLGKWVAGKDNTLVNDGIITLVDGKVKQEINLRLQNVERGVLEIELECVPLTQ 255
            MG+AEIDIQPL+T+A A     +   MQ+GKW+   DN L+ D II + DGKVKQE+ ++LQNVE G LE+E+E +PL Q
Sbjct:  258 MGEAEIDIQPLITSAMAFGDPEMFGDMQIGKWLKSHDNALIEDSIINIADGKVKQEVQIKLQNVESGELELEMEWLPLEQ 337          
The following BLAST results are available for this feature:
BLAST of EY664599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AGD11_ARATH7.163e-3079.01Probable ADP-ribosylation factor GTPase-activating... [more]
AGD13_ARATH3.335e-1955.00Probable ADP-ribosylation factor GTPase-activating... [more]
AGD12_ARATH4.355e-1955.00ADP-ribosylation factor GTPase-activating protein ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664599 ID=EY664599; Name=EY664599; organism=Citrus sinensis; type=EST; length=571bp
CCACGCGTCCGCTTTATGGGGGATGCCGAGATTGACATTCAACCTTTAGT
GACTGCTGCCCGAGCCTGTGAAACATCCAATATCAATGAGTCCATGCAAC
TTGGGAAATGGGTAGCGGGGAAGGATAACACTCTAGTCAATGATGGCATC
ATAACCCTAGTAGATGGGAAAGTGAAACAGGAAATCAATCTGCGGCTGCA
AAATGTCGAGAGGGGGGTGCTAGAAATAGAGCTCGAATGTGTCCCTCTAA
CTCAGTAGGTGCTGGAATATAGGTTGTAATGATAGAAGTGGTTATTGTTT
GCAAAACTGTATTATAGGAAACAATTGTAGCCTATACTGACTAGCACATT
GCCCGTATGTTTGTTCTTCGTTAATATAAAAATCACAGAATACCAAGTAA
CAAACTGTAGGATTTTCATTGTATGATGTGTAAATCCTTTGTAAGGATCA
GGATTCGGCATAGATCCTGATCTGATCCTGATCCGAAACTGTAAAAAAGA
AATTGCTAGTTTCCGTAGCAGATATTGATTACACATTATTGTCATCTTTA
AAAAAAAAAAAAAAAAAAAAA
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