EY664598

Overview
NameEY664598
Unique NameEY664598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7118 contig Csv1_Contig7118:34..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.656e-55
Identity = 111/176 (63.07%), Postives = 134/176 (76.14%), Query Frame = 3
Query:  120 PAILACP-PLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGT 644
            PA  +C  P  VT + F++SGLG+AGNTT+II AA+TPAF AQFP VNGLG+SLARL L  GGVIP HTHP ASE+LLVV G I  GF++S  NT Y+KTLKKGDIM+FPQG  H+QVN     AL F SF+SP+  LQI DF+LF N+L ++L  QTTFLD A +K+LK +LGGT
Sbjct:   34 PAGYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD-NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKNDLPTELIAQTTFLDAAQIKKLKGVLGGT 208          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.030e-53
Identity = 105/176 (59.66%), Postives = 133/176 (75.57%), Query Frame = 3
Query:  120 PAILACP-PLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGT 644
            PA  +C  P +VT + F++SGLG+AGNTT+I  AA+TPAF AQFP VNGLG+SLARL L  GGV+P HTHP ASE+LLVV G I  GF++S  NT Y+KTLKKGDI++FPQG  H+QVN     A+ F SF+SP+  LQI DF+LF N+L+++L  QTT LD   +K+LK +LGGT
Sbjct:   34 PAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD-NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKNDLATELIAQTTLLDAPQIKKLKGVLGGT 208          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.214e-51
Identity = 99/168 (58.93%), Postives = 125/168 (74.40%), Query Frame = 3
Query:  141 PLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGT 644
            P  VT++ F F+GLG AGNT++II AA+TPAF   +  +NGLG+SLARL LA GGVIP+HTHP ASE+L+V+ G I  GFI SSAN  Y+KTL +GD M+FPQG  H+Q+N+    AL F +F S +  LQI  F+LFAN+L S+L E TTFL DA VK+LK +LGGT
Sbjct:   44 PDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI-SSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDAEVKKLKGVLGGT 210          

HSP 2 Score: 31.5722 bits (70), Expect = 2.214e-51
Identity = 14/25 (56.00%), Postives = 15/25 (60.00%), Query Frame = 2
Query:   68 AMVNDFCVPDLKLTDSPAGYPCVPP 142
            A V DFCV D K   SP+GY C  P
Sbjct:   20 ASVQDFCVADPKGPQSPSGYSCKNP 44          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.472e-51
Identity = 108/181 (59.67%), Postives = 129/181 (71.27%), Query Frame = 3
Query:  108 RIVPPAILAC-PPLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGTG 647
            R   PA   C  P+ V    F+FSGLG  GNTT+IINAA+TPAF AQFP +NGLGLS ARL LA  GVIP+HTHP ASE+L V+ G IT GF+ SSAN  YV+TLK G +M+FPQG  H+Q+NA    A    +FNS N  LQI DF+LFAN+L ++L   TTFLD  TVK+LK +LGGTG
Sbjct:   29 RAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFV-SSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANSLPTELVVGTTFLDATTVKKLKGVLGGTG 208          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.452e-51
Identity = 107/203 (52.71%), Postives = 136/203 (67.00%), Query Frame = 3
Query:   39 SLLSYPLPTMLWLTTSACLT*S*RIVPPAILACPPLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGTG 647
            S L  P  +M  LT   C+        PA   C   +   D F + GL  AGNT+++I AA+TPAF  QFP VNGLG+S ARL +A GGV+P+HTHPAASE+L V  G +  GFI+SS+NT Y +TL  GDIM+FPQG  HYQ NA    A+   +F+ PN  LQITD++LFANNL S + E+ TFLDDA VK+LK++LGG+G
Sbjct:   13 SFLLLPFSSMA-LTQDFCVADLTCSDTPAGYPCKASVGAGD-FAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSSSNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQITDYALFANNLPSAIVEKVTFLDDAQVKKLKSVLGGSG 213          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.442e-50
Identity = 103/176 (58.52%), Postives = 131/176 (74.43%), Query Frame = 3
Query:  120 PAILACP-PLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGT 644
            PA  +C  P  V  + F+FSGLG+AGNT++II AA+TPAF AQFP VNGLG+S+ARL LA GGV+P HTHP ASE+L+V  G I  GF++S  NT Y++TL+KGDIM+FPQG  H+QVN     AL F SF S +  LQI DF+LF N+L +++  QTTFLD A +K+LK +LGGT
Sbjct:   39 PAGFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASD-NTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKNDLPTEVIAQTTFLDAAQIKKLKGVLGGT 213          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 9.052e-50
Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 3
Query:  141 PLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGT 644
            P  VT++ F FSGLG AGNT+++I AA+TPAF   F  +NGL +SLARL LA GGVIP+HTHP ASE+L+V+ G I  GFI SSAN  Y+KTL +GD M+FPQG  H+Q+N+    AL F +F S +  LQI  F+LFAN+L S+L E TTFL D  VK+LK +LGGT
Sbjct:   44 PDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI-SSANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDEEVKKLKGVLGGT 210          

HSP 2 Score: 30.4166 bits (67), Expect = 9.052e-50
Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 2
Query:   68 AMVNDFCVPDLKLTDSPAGYPCVPP 142
            A V DFCV D K   +P+GY C  P
Sbjct:   20 ASVQDFCVADPKGPQNPSGYSCKNP 44          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.341e-47
Identity = 105/181 (58.01%), Postives = 128/181 (70.72%), Query Frame = 3
Query:  108 RIVPPAILAC-PPLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGTG 647
            R   PA   C  P+ V    F+FS LG  GNTT+II+AA+TP F AQFPA+NGLG+S ARL LA  GVIP+HTHP ASE+L V+ G IT GFI SSAN+ YV+TLK G +M+FPQG  H+Q+NA    A    +F+S +  LQI DF+LFAN LS++L   TTFL  ATVK LK +LGGTG
Sbjct:   29 RAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFI-SSANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPGLQILDFALFANTLSTELVSATTFLPPATVKTLKGVLGGTG 207          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 7.972e-35
Identity = 89/180 (49.44%), Postives = 107/180 (59.44%), Query Frame = 3
Query:  108 RIVPPAILACPPLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFS-LFANNLSSQLEEQTTFLDDATVKRLKAILGGT 644
            R  P   +      VT   F++SGL   GNTT+IINAA+TPAF  QFP V GLG++LARL LA GGVIP+HTHP ASEIL VV G I   FI SS N  Y K L  GD+M+FPQG   +Q   +   A G       N  LQI +F   F      +    TT LD+AT+K+LK+ LGGT
Sbjct:   36 RDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFI-SSGNKVYEKALYPGDVMVFPQGLLDFQ-EITGKIAPGLCELRQRNPGLQILEFQHCFPTIFPPKTIAGTTCLDEATIKKLKSGLGGT 213          

HSP 2 Score: 26.1794 bits (56), Expect = 7.972e-35
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 2
Query:   65 NAMVNDFCVPD-LKLTDSPAGYPC 133
            NA VNDFCV +     D+P+G+ C
Sbjct:   21 NASVNDFCVANGPGARDTPSGFVC 44          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.448e-34
Identity = 88/217 (40.55%), Postives = 120/217 (55.30%), Query Frame = 3
Query:   33 SSSLLSYPLPTMLWL----TTSACLT*S*RIV--------PPAILACPPLMVTDDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANNLSSQLEEQTTFLDDATVKRLKAILGGTG 647
            S+ LL   L TM+ L    TT+  LT    +         P      P   VT   F    L   G      N ++  AF  Q+PAVNGLG+S +R+ +  GGV+P+HTHPA SE+L V+ G +  GFISSS N  Y K + KG + +FPQG  H+Q N     A+ F +++S N  LQI D++LFANNL +    + TFL +A V+RLK+  GG+G
Sbjct:    3 STPLLPVLLSTMILLSAVSTTTTALTQDFCVANLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSSDNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPGLQILDYALFANNLPTSYVVKGTFLAEAEVRRLKSKFGGSG 219          
The following BLAST results are available for this feature:
BLAST of EY664598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
AB19A_PRUPE5.656e-5563.07Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
AB19B_PRUPE9.030e-5359.66Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
GL33_ARATH2.214e-5158.93Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GL31_ARATH6.472e-5159.67Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL814_ORYSJ8.452e-5152.71Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
ABP20_PRUPE1.442e-5058.52Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GLP1_SINAL9.052e-5058.33Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GLP1_BRANA4.341e-4758.01Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GLP1_IPONI7.972e-3549.44Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL813_ORYSJ1.448e-3440.55Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-C12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664598 ID=EY664598; Name=EY664598; organism=Citrus sinensis; type=EST; length=829bp
CTGAATTTAACCACAAAGGCTTCACATTCTGTTCTTCTTCCTTGCTTTCA
TATCCTCTTCCTACAATGCTATGGTTAACGACTTCTGCGTGCCTGACCTA
AAGCTGACGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCCCGCTCATGG
TTACCGATGACCACTTCTTATTTTCGGGCCTCGGCGTGGCCGGAAACACC
ACAAGCATTATCAACGCCGCAATGACACCTGCATTTGGAGCTCAATTTCC
GGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTATATCTTGCAAAGG
GAGGGGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAATCCTTCTT
GTTGTGCATGGCTGCATAACTGACGGGTTCATTTCCTCTTCAGCTAACAC
TGGGTACGTAAAGACGCTTAAGAAGGGAGATATCATGATCTTTCCACAAG
GGTAGCAGCATTATCAAGTAAATGCCAGTGCGGACGGAGCCCTCGGGTTT
GATAGCTTCAACAGCCCGAATACTGTACTCCAAATCACCGATTTCAGCTT
ATTCGCTAACAACTTGTCTTCCCAATTGGAGGAGCAAACCACTTTCCTTG
ACGATGCTACGGTGAAGAGGCTCAAGGCTATCCTTGGTGGCACCGGCTAC
GCTTATTACTTACCACATTCTTCATTTGTAGATCTGAGTTCTTAATTNCA
TTAATTGCTAATGTTGGTGATTGTTGGAATTCACGAGTTATGATAATATG
CTGTCACTACCCATATCTTTTCTTCTGATAAATAAATCTCTCTCAAAAAA
AAAAAAAAAGGAGGCCGCTCTANAGATTC
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