CX671967

Overview
NameCX671967
Unique NameCX671967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana GN=At3g12390 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.066e-59
Identity = 125/153 (81.70%), Postives = 131/153 (85.62%), Query Frame = 3
Query:  204 DGEAGGXXXXXXXXXXXXXAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESS--AMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            DGEAGG             AMLKLGMKPI GVSRVTVKKSKNILFVISKPDVFKSP +DTYVIFGEAKIEDLSSQ+Q+QAAEQFKAPDLS+V+SK ESS  A+ QDDEEVDE GVEPKDIELVMTQAGVSR  AVKALKAADGDIVSAIMELT
Sbjct:   50 DGEAGGKSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQIQSQAAEQFKAPDLSNVISKGESSSAAVVQDDEEVDEEGVEPKDIELVMTQAGVSRPNAVKALKAADGDIVSAIMELT 202          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_PINTA (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.303e-57
Identity = 116/133 (87.22%), Postives = 124/133 (93.23%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQDDE-EVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            AMLKLGMKP+ GVSRVT+KKSKNILFVIS PDVFKSPT+DTY+ FGEAKIEDLSSQLQTQAAEQFKAP+LSHV  KPESS  AQ+DE EVD+TGVEPKDIELVMTQAGVSR KAVKALKAADGDIVSAIM+LT
Sbjct:   72 AMLKLGMKPVSGVSRVTIKKSKNILFVISNPDVFKSPTSDTYIAFGEAKIEDLSSQLQTQAAEQFKAPNLSHVTMKPESSTAAQEDEDEVDDTGVEPKDIELVMTQAGVSRTKAVKALKAADGDIVSAIMDLT 204          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA3_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana GN=At5g13850 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.211e-56
Identity = 121/161 (75.16%), Postives = 132/161 (81.99%), Query Frame = 3
Query:  195 GHRDGEAGGXXXXXXXXXXXXXAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA-------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            GH DGEAGG             AMLKLGMKPI GVSRVTVKKSKNILFVISKPDVFKSP +DTYVIFGEAKIEDLSSQLQ+QAAEQFKAP+LS+V+S+ E+S+ A        DDEEVDE GVEPKDIELVMTQAGVS+ +AVKALK A+GDIVSAIMELT
Sbjct:   44 GH-DGEAGGRSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQAAEQFKAPNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPKDIELVMTQAGVSKPRAVKALKLANGDIVSAIMELT 203          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 9.363e-48
Identity = 97/138 (70.29%), Postives = 118/138 (85.51%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSA------MAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            AMLKLGMKP+ GVSRVT+K++KN+LF ISKPDVFKSP ++TYVIFGEAKIEDLSSQLQTQAA+QF+ P++     + E+S       + +D+EE+DETGVE +DI+LVMTQAGVSR+KAVKALK+ DGDIVSAIMELT
Sbjct:   79 AMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIFGEAKIEDLSSQLQTQAAQQFRMPEIGATSQRAEASTATVEAQVEEDEEEIDETGVEARDIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELT 216          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana GN=At4g10480 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.086e-47
Identity = 97/138 (70.29%), Postives = 117/138 (84.78%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            AMLKLGMKP+  VSRVT+K+SKN+LFVISKPDVFKSP ++TYVIFGEAKI+D+SSQLQ QAA++FK PD++ ++   + S  A      +DDE+VDETGVE KDI+LVMTQAGVSR KAVKALK ++GDIVSAIMELT
Sbjct:   74 AMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEAKIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEAKDIDLVMTQAGVSRPKAVKALKESNGDIVSAIMELT 211          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana GN=At1g33040 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.349e-45
Identity = 92/138 (66.67%), Postives = 116/138 (84.06%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAM------AQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            A+LKLGMKP+  VSRVT+K++KN+LFVISKPDV+KSP  +TYVIFGEAK++DLSSQLQTQAA++FK PD++ ++    S A        +D+++VD+TGVE +DI+LVMTQAGVS+AKAV ALKA DGDIVSAIMELT
Sbjct:   71 AVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQAAQRFKMPDVTSMLPNAGSEATMAPLAEEEDEDDVDDTGVEARDIDLVMTQAGVSKAKAVSALKANDGDIVSAIMELT 208          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_ORENI (Nascent polypeptide-associated complex subunit alpha OS=Oreochromis niloticus GN=naca PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.601e-39
Identity = 86/136 (63.24%), Postives = 110/136 (80.88%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP--DLSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK P   +S+V    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK  + DIV+AIMELT
Sbjct:   79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVPGETVSNVQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACAD_MOUSE (NAC-alpha domain-containing protein 1 OS=Mus musculus GN=Nacad PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.083e-39
Identity = 84/141 (59.57%), Postives = 105/141 (74.47%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVV---------SKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            AM KLG++ I GV+R+T++KSKNILFVI+KPDVFKSP +DTYV+FGEAKIEDLS Q+   AAE+FK P     +          +PE     ++DEEV+E G+EP+DIELVM QA V+RAKAV+ALK    DIV+AIMELT
Sbjct: 1363 AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPELSPGPRVRPECEEQEEEDEEVEEAGLEPRDIELVMAQANVTRAKAVRALKDNHSDIVNAIMELT 1503          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_DROME (Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.770e-38
Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 3
Query:  264 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA-----QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            MLKLG+K I GV+RVT++KSKNILFVI+ PDV+K+P +DTY++FGEAKIEDLS Q Q  AAE+FKAP+ +       ++        +D+E+VD+TGV+ KDIELV+TQA  +RAKA+KALK  + DIV+AIMELT
Sbjct:   80 MLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEAAGAADSVGATTSVAPIAEEDEEDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELT 215          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_DANRE (Nascent polypeptide-associated complex subunit alpha OS=Danio rerio GN=naca PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.770e-38
Identity = 84/136 (61.76%), Postives = 109/136 (80.15%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK  + DIV+AIMELT
Sbjct:   79 AMSKLGLRQVAGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214          
The following BLAST results are available for this feature:
BLAST of CX671967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA1_ARATH1.066e-5981.70Nascent polypeptide-associated complex subunit alp... [more]
NACA_PINTA1.303e-5787.22Nascent polypeptide-associated complex subunit alp... [more]
NACA3_ARATH3.211e-5675.16Nascent polypeptide-associated complex subunit alp... [more]
NACA2_ARATH9.363e-4870.29Nascent polypeptide-associated complex subunit alp... [more]
NACA4_ARATH2.086e-4770.29Nascent polypeptide-associated complex subunit alp... [more]
NACA5_ARATH4.349e-4566.67Nascent polypeptide-associated complex subunit alp... [more]
NACA_ORENI1.601e-3963.24Nascent polypeptide-associated complex subunit alp... [more]
NACAD_MOUSE6.083e-3959.57NAC-alpha domain-containing protein 1 OS=Mus muscu... [more]
NACA_DROME1.770e-3859.56Nascent polypeptide-associated complex subunit alp... [more]
NACA_DANRE1.770e-3861.76Nascent polypeptide-associated complex subunit alp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_14B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B11-C22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671967 ID=CX671967; Name=CX671967; organism=Citrus sinensis; type=EST; length=866bp
TTTCAAGGTCTTGAGGAATTTGCCTCTGTTTATCCCCAAGAACAGCCATG
ACTGCTCAGACCCAAGAAGAGCTTCTCGCCTCTCTTCTCGAACAGCAAAA
AATCGATGATGATAAGCCTGTTGTAGAAGATGATGAAGATGAAGACGAGG
ATGAGGATGAAGATGATGAGAAAGACGAAGATGAAGCTGACGAGGGACAC
CGAGATGGAGAGGCAGGTGGTAGGTCAAAACAGAGCAGAAGTGAAAAGAA
GAGTCGCAAAGCAATGTTAAAGCTTGGAATGAAACCTATCCCTGGTGTTA
GCCGGGTTACCGTCAAAAAGAGCAAGAATATCTTGTTTGTTATCTCAAAA
CCGGATGTTTTCAAGAGCCCGACAACAGATACATATGTAATCTTTGGTGA
GGCAAAGATCGAGGACTTGAGCTCACAATTGCAGACTCAGGCAGCAGAGC
AATTTAAGGCTCCTGATCTCAGCCACGTGGTCTCCAAACCTGAGTCATCA
GCCATGGCTCAGGACGATGAAGAAGTAGATGAGACCGGGGTTGAGCCTAA
GGACATAGAGTTAGTAATGACACAGGCAGGAGTCTCCAGGGCAAAGGCTG
TGAAAGCGCTGAAGGCTGCAGATGGGGACATAGTTTCAGCTATCATGGAG
CTTACCAACTGAGAGTTTTCTTAGATGTTTGTGTGCTGCTCACAAGAAAA
CATTTCACGCCACAGTATTCTTTATTACCAAATACCCAATATTGTCTGTG
GGAATTGAAGAGGAGAGAATCTGCAAAGCTGTTGATTGTGAAATGGAACT
GTTTGTGATTCCTTTTGCTTTGGCTGGGCAATTTACTTGTTTTTCTTTCA
TATGTGACTGGTTCCT
back to top