CX671880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671880 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 2.965e-96 Identity = 173/210 (82.38%), Postives = 192/210 (91.43%), Query Frame = -3 Query: 196 PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 825 P EV AAE + LPVAGLTA QALT AG+KLDG+G++ NILVTAASGGVGHYAVQLAKL N HVTA+CGARNIEFVKSLGADEVLDYKTP+GAALKSPSG+KYDAV+HCA GIP+S FEPNL NGKVIDITPGP+AM T+A+KK+T SKKQLVPLLLIPK ENL+F+V LVKEGK+KTVI+SKHPLSKAEDAWA+SIDGHATGKIIVEP Sbjct: 120 PQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVEP 329
BLAST of CX671880 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 8.926e-93 Identity = 165/210 (78.57%), Postives = 188/210 (89.52%), Query Frame = -3 Query: 196 PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 825 P EVSAAEG+ LPVA LTAHQALTQ A +KLDGSG++KNIL+TAASGGVGHYAVQLAKLGNTHVTA+CGARN++FVK LGADEVLDYKTP+GA+L SPSG+KYD V+H A+GIPWSTFEPNL GKVID+TPGP+AM+TFA KKLTFSKKQLVPLLLIPK N +++V LVKE KLKTVI+SKHPLSK EDAW+ + GHATGKII+EP Sbjct: 120 PPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGIPWSTFEPNLSEAGKVIDLTPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNLVKEKKLKTVIDSKHPLSKGEDAWSRIMGGHATGKIIIEP 329
BLAST of CX671880 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.722e-15 Identity = 65/226 (28.76%), Postives = 104/226 (46.02%), Query Frame = -3 Query: 202 PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI--PWS-TFEPNLGTNGKVIDITPGPSAMLTFALKK------LTFSKKQLVPL---------LLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 825 P ++ + + LP LTA A+ + G+ D + K +L+ ASGGVG +A+Q+ K + HVTA C E V+ LGAD+V+DYK+ + A + S + +D ++ G W+ F V +TP M + +T K L + LD + +LV+ GK++ VI P SK +A+ + GHA GK ++ Sbjct: 170 PRSLTHTQAASLPYVALTAWSAINKVGGLN-DRNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEA-QLKSSKPFDFILDNVGGSTETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLKHFWQGVHYRWAFFMASGPCLDDIAELVEAGKIQPVIEKTFPFSKVPEAFLKVERGHARGKTVI 393
BLAST of CX671880 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.473e-15 Identity = 63/231 (27.27%), Postives = 101/231 (43.72%), Query Frame = -3 Query: 202 PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKT-----------PDGAALKSPSG----------RKYDAVIHCATGIPWSTFEPNLGTNGKVID--ITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 825 P ++ + + LP LTA A+ + G+ D + K +L+ ASGGVG +A+Q+ K + HVTA C E V+ LGAD+V+DYK+ P L + G +K+ + P+ LG ++ +T G A+ F + + LD + +LV GK++ VI P SK +A+ + GHA GK ++ Sbjct: 170 PKSLTHTQAASLPYVALTAWSAINKVGGLN-DKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHF------WKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVI 393
BLAST of CX671880 vs. ExPASy Swiss-Prot
Match: YBI2_SCHPO (Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe GN=SPBC16A3.02c PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.136e-13 Identity = 64/217 (29.49%), Postives = 91/217 (41.94%), Query Frame = -3 Query: 199 PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-----IPWSTFEPN---LGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 825 P VS EG+G +AGLTA + L + VK +++ ASGGVG +AV LAK VT N++ KSLGA LDYK D + YD V C +P+ G G + G T + L S +LL +E L V V + +KTVI+S + +A+ + GK+I++ Sbjct: 135 PDGVSFNEGAGFGIAGLTAWEVLVRQMKVK-----PGTKLVIEGASGGVGTFAVALAKALECEVTTISSTENLDLCKSLGATHTLDYK-KDNLVERLADLGPYDFVFDCVNDNVLYRASSKFVKPDGAFFGIGGDITLSYVGSRLSRTLRPRVLGGSSHSYYNILLHVDQEMLRDFVDFVMKHNIKTVIDSVYDFEDTVEAFNRLMTHRCKGKVIIK 345
BLAST of CX671880 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12 Identity = 66/220 (30.00%), Postives = 98/220 (44.55%), Query Frame = -3 Query: 196 PSEVSAAEGSGLPVAGLTAHQALTQ---SAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK--LGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKL---VKEGKLKTVINSK--HPLSKAEDAWAESIDGHATGKIIVEP 825 P + A+ +GLP+A TA + L + SAG K+ILV +GGVG +QLAK G + V A+ +E V+SLGAD +DY + L +DA+ C + + GKV+ +T + P N D L KL ++ GK+K V++ K P S+ DA++ HATGK++V P Sbjct: 197 PKNIDFAQAAGLPLAIETADEGLVRTEFSAG---------KSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAV------KVIKEGGKVVALTGAVTP-----------------PGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNHATGKVVVYP 384
BLAST of CX671880 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = -3 Query: 433 LPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT-PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDI 792 L V+G TA+ +L + L G + K +LVTAA+GG G +A+QL+K HV +C + F+KSLG D ++YKT P G LK D V G + L T G++I I Sbjct: 153 LLVSGTTAYISLKE-----LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVI 269 The following BLAST results are available for this feature:
BLAST of CX671880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671880 ID=CX671880; Name=CX671880; organism=Citrus sinensis; type=EST; length=827bpback to top |