CX671879

Overview
NameCX671879
Unique NameCX671879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7941 contig Csv1_Contig7941:16..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.111e-60
Identity = 120/276 (43.48%), Postives = 170/276 (61.59%), Query Frame = 3
Query:   63 NLACRSDGTVNRRLSAFLDYKVPPSVKPINGVKTSDITVDQSRKLWFRLFTPINANA-----------DNSRMPVIVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRYCE 857
            NL  R DGT NR L+ FLD KVP +  P+NGV + D+ +D+   L  R++ P +A             D   +PVIV+FHGG     SA+S+ +DTLCRR      AV++SVNYR +PE++YPC Y+DG+ V+ +++++            +   F+ GDS+GGNI H+VAV+A     + ++++G I + P FGG ERTESE RL  G  F+ V   DW+WRAFLPEG DR+HPA + FGP S   ++ G  FP ++V+V G D + DWQ +Y E
Sbjct:   32 NLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSSWLRSKKDSKVRI---FLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRL-DGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRS--KSLEGLSFPKSLVVVAGLDLIQDWQLKYAE 298          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.325e-54
Identity = 111/278 (39.93%), Postives = 164/278 (58.99%), Query Frame = 3
Query:   63 NLACRSDGTVNRRLSAFLDYKVPPSVKPINGVKTSDITVDQSRKLWFRLFTPINAN-------------ADNSRMPVIVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRYCE 857
            N+  R DGT NR L+ +LD KV  +  P++GV + D+ +D+   L  R++ P  A+              D   +PVI++FHGG     SA+S+ +DTLCRR       V++SVNYR +PE+ YPC Y+DG+  + ++++    +        +   F+ GDS+GGNIAH+VA++A     + ++++G I + P FGG ERTESE  L  G  F+ V   DW+W+AFLPEG DR+HPA N F P   G ++ G  FP ++V+V G D + DWQ  Y E
Sbjct:   32 NILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVHI---FLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESEKSL-DGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPR--GKSLEGVSFPKSLVVVAGLDLIRDWQLAYAE 300          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.591e-54
Identity = 116/286 (40.56%), Postives = 163/286 (56.99%), Query Frame = 3
Query:   63 NLACRSDGTVNRRLSAFLDYKVPPSVKPINGVKTSDITVDQSRKLWFRLF-TPINANADNSR-------------------MPVIVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLR-NCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRYCE 857
            N+  R+DGT  R L  +LD +VP + +P+ GV + D  +DQS  L  R++      +A+                       PVI++FHGG  V  SA S+ +D+LCRRF K    V++SVNYR +PEH+YPC Y+DG+  + ++ + P    F   G D +   F+ GDS+GGNIAHHVAV+A       + + G I +   FGG ERTESE RL  G  F+ ++  DW+W+A+LPE +DRDHPA N FGPN  G  + G  F  +++IV G D   D Q  Y +
Sbjct:   32 NILRRADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQP----FMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE---GVKVCGNILLNAMFGGTERTESERRL-DGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPN--GRRLGGLPFAKSLIIVSGLDLTCDRQLAYAD 307          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.240e-52
Identity = 109/276 (39.49%), Postives = 163/276 (59.06%), Query Frame = 3
Query:   75 RSDGTVNRRLSAFLDYKVPPSVKPINGVKTSDITVDQSRKLWFRLFTPINANADNSR--------------MPVIVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLR-NCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRYCE 857
            R DG+ NR L+ FLD KVP +  P++GV + D  VD +  L  R++ P +                     +PV+++FHGG     SA+S+ +DT CRR       V++SV+YR SPEH+YPC Y+DG++ + ++ +    +     G D     ++ GDS+GGNIAH+VAV+A       + ++G I + P FGG+ERT+SE +   G  F+ ++  DW+WRA+LPEG DRDHPA N FGP   G ++ G +FP ++V+V G D + DWQ  Y +
Sbjct:   36 RPDGSFNRDLAEFLDRKVPANSFPLDGVFSFD-HVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQ----SGKDSNVYVYLAGDSSGGNIAHNVAVRATNE---GVKVLGNILLHPMFGGQERTQSE-KTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPR--GQSLKGVNFPKSLVVVAGLDLVQDWQLAYVD 300          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.861e-15
Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = 3
Query:  114 LDYKVPPSVKPINGVKTSDITVDQSRKLWFRLFTPINANADNSRMPVIVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIA 530
            LDY  P S + I    T+ + +        RL+ P       +R   ++YFHGGG  F S+   AFD L R  A  L+AV++ V+YRL+P+H +P Q+EDG   + F         +   G D     I GDS+GGN+A
Sbjct:   68 LDYTQPLSDEYITVTDTTFVDIP------VRLYLP--KRKSETRRRAVIYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFFLLEKILTKY---GVDPTRICIAGDSSGGNLA 195          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: AAAD_BOVIN (Arylacetamide deacetylase OS=Bos taurus GN=AADAC PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  255 IVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVA 542
            + Y HGGG  F S D  ++D L R  A+ L+AV+IS NYRL+P++ +P Q+ED +  + +  +  N E +   G D     I GDSAGGN+A  VA
Sbjct:  107 LFYIHGGGWCFGSNDYYSYDLLSRWTAERLDAVVISTNYRLAPKYHFPVQFEDVYTALKWFLDPQNLESY---GVDPGRIGISGDSAGGNLAAAVA 199          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.936e-13
Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 3
Query:  255 IVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVA 542
            + Y HGGG    SA  S +D L RR A  L+ V++S NYRL+PE+ +P Q+ED +D + +       E +   G D     + GDSAGGN+A  VA
Sbjct:  106 LFYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLRQDVLEKY---GVDPERVGVSGDSAGGNLAAAVA 198          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12
Identity = 53/203 (26.11%), Postives = 93/203 (45.81%), Query Frame = 3
Query:  162 TSDITVDQSRK-----LWFRLFTPINANADNSRMPVIVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVA--VKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVF 749
            T DIT+ +        +  R+F P +  A     P  ++FHGGG V  + ++   ++      ++   V+++V+YRL+PE  +P   +DG++ + +      +E   T G +     +GG SAGGNIA  ++  V A    F  L +  ++          +T     L    P L   ++ W+ R +LP   D  +P A+ F
Sbjct:   68 TEDITIPRKHTKAPSGVPSRIFRP-HGTAPEGGWPCFLWFHGGGWVLGNINTE--NSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLYC-----YENADTLGINPNKIAVGGSSAGGNIAAVLSHKVAASPANFPPLVLQLLVVPVCDNTANAKTHKSWELFENTPQLPAAKMMWYRRHYLPNEKDWSNPEASPF 262          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: YR526_MIMIV (Putative alpha/beta hydrolase R526 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R526 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11
Identity = 74/283 (26.15%), Postives = 115/283 (40.64%), Query Frame = 3
Query:   51 NFVMNLACRSDGTVNRRLSAFLDYKVPPSVKPINGVKT-SDITVDQSRKLWFRLFTPI----NANA-------DNSRMPVIVYFHGGGGVFLSADSSAFDTLCRRFAKEL----NAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRY 851
            N   N A   D  V + + +  D K    V P    K  + I  DQS K    +   +    N NA       +  R+PV+ Y HG G V     +        RF  E+    N  +I VNY L+PE K+P Q  + +D + +  +N           D  N  + GDS GGN+A  +A+    RE T       I + P       T+S     +G P+L+ + ++WF+  +     +   P+     P +  D    +  P T+++V   D L D  + Y
Sbjct:   27 NTADNTADNIDPIVKKFVDSIKDAKPVYEVTPEEARKNLNSIQSDQSYKTTVDMENVVVNDKNVNATIIRPKGNRDRLPVVFYVHGAGWVMGGLQTHG------RFVSEIVNKANVTVIFVNYSLAPEKKFPTQIVECYDALVYFYSNAQ-----RYNLDFNNIIVVGDSVGGNMATVLAM--LTREKTGPRFKYQILLYPVISAAMNTQSYQTFENG-PWLSKKSMEWFYEQYTEPNQNLMIPS---ISPINATDRSIQY-LPPTLLVVDENDVLRDEGEAY 291          
BLAST of CX671879 vs. ExPASy Swiss-Prot
Match: AAAD_MOUSE (Arylacetamide deacetylase OS=Mus musculus GN=Aadac PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11
Identity = 44/150 (29.33%), Postives = 70/150 (46.67%), Query Frame = 3
Query:  255 IVYFHGGGGVFLSADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAF 704
            + Y HGGG    SA   ++DTL R  A +L+AV++S +Y L+P+H +P Q+ED +  + +       E +   G D R   + GDSAGGN+A  V  +  +     + +     I P     +      +  S  P L    +  FW  +
Sbjct:  106 LFYIHGGGWCLGSAAHFSYDTLSRWTAHKLDAVVVSTDYGLAPKHHFPRQFEDVYRSLRWFLQEDVLEKY---GVDPRRVGVSGDSAGGNLAAAVTQQLIQDPDVKIKLKVQALIYPALQALDTNVPSQQEGSHFPVLTRSLMVRFWSEY 252          
The following BLAST results are available for this feature:
BLAST of CX671879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
GI1L3_ARATH2.111e-6043.48Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L1_ARATH1.325e-5439.93Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
GID1_ORYSJ8.591e-5440.56Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
GI1L2_ARATH1.240e-5239.49Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
ADCL2_HUMAN7.861e-1535.97Arylacetamide deacetylase-like 2 OS=Homo sapiens G... [more]
AAAD_BOVIN1.482e-1342.71Arylacetamide deacetylase OS=Bos taurus GN=AADAC P... [more]
AAAD_RABIT1.936e-1341.67Arylacetamide deacetylase OS=Oryctolagus cuniculus... [more]
YFZ3_SCHPO1.639e-1226.11AB hydrolase superfamily protein C1039.03 OS=Schiz... [more]
YR526_MIMIV1.062e-1126.15Putative alpha/beta hydrolase R526 OS=Acanthamoeba... [more]
AAAD_MOUSE3.091e-1129.33Arylacetamide deacetylase OS=Mus musculus GN=Aadac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13F10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13F10-K19-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671879 ID=CX671879; Name=CX671879; organism=Citrus sinensis; type=EST; length=859bp
GAAATATGTCTGGTCTCTCATGGAAAATCAAGCTCATCAGTTCCATTTCC
AACTTCGTCATGAACCTCGCTTGCCGCTCAGACGGCACCGTCAATCGCCG
TCTGTCAGCTTTCCTCGACTACAAAGTACCTCCTTCCGTCAAACCTATCA
ACGGCGTCAAGACCTCCGACATAACCGTCGACCAATCTCGCAAACTTTGG
TTCCGCCTCTTCACCCCAATAAACGCCAACGCTGATAATTCTCGCATGCC
CGTCATCGTCTACTTCCACGGCGGAGGAGGCGTGTTCCTGTCCGCCGACT
CATCAGCTTTTGACACCCTCTGCCGAAGATTCGCCAAAGAACTTAACGCC
GTCATCATCTCCGTTAATTACCGGCTCTCGCCTGAGCATAAATACCCATG
TCAGTACGAAGATGGCTTCGATGTCATTACGTTCATCGACAATAACCCCA
ACTTTGAAGGCTTTCCGACGGACGGCGCCGATCTAAGGAACTGTTTCATC
GGCGGCGACAGTGCAGGAGGTAACATAGCTCACCACGTGGCGGTCAAGGC
TTGTAGAAGAGAGTTTACAAATTTGAATATCATTGGAGTCATAGCGATAC
AGCCAGGTTTCGGCGGAGAAGAAAGGACGGAATCCGAAATAAGGCTTGCT
TCCGGGGCTCCGTTTCTCAACGTGGAGCGTATTGATTGGTTCTGGAGAGC
GTTTCTGCCGGAAGGGTCAGACAGGGACCACCCGGCTGCGAATGTTTTTG
GGCCGAATTCTGGTGGTGATGCTATTTCGGGGTTTGATTTTCCGGCGACG
GTTGTGATTGTTGGAGGGTTTGATCCTCTACTCGACTGGCAAAAGAGGTA
CTGTGAAGG
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