CX671867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50 Identity = 109/167 (65.27%), Postives = 111/167 (66.47%), Query Frame = -2 Query: 201 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 701 GIIKGTMTTTHSYTGDQ LNIVPTST LNGIALRVPTPN VSKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC VMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+ Sbjct: 235 GIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 401
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 195.667 bits (496), Expect = 2.423e-49 Identity = 108/167 (64.67%), Postives = 110/167 (65.87%), Query Frame = -2 Query: 201 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 701 GIIKGTMTTTHSYTGDQ LNIVPTST LNGIALRVPTPN VSKKTFAEEVNAAFR+SA+ ELKGIL VCDEPLVSVDFRC VMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 230 GIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 396
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.398e-49 Identity = 107/167 (64.07%), Postives = 110/167 (65.87%), Query Frame = -2 Query: 201 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 701 GIIKGTMTTTHSYTGDQ LNIVPTST LNGIALRVPTPN VSKKTFAEEVNAAFR++A+ ELKGIL VCDEPLVSVDFRC VMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 67 GIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 233
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 4.570e-48 Identity = 107/167 (64.07%), Postives = 108/167 (64.67%), Query Frame = -2 Query: 201 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 701 GIIKGTMTTTHSYTGDQ LNIVPTST LNGIALRVPTPN VSKKTFAEEVN AFRESA EL GILSVCDEPLVSVDFRC VMGDD+VKVIAWYDNEWGYSQRVVDLADIVANNWK Sbjct: 239 GIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQRVVDLADIVANNWK 405
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.126e-46 Identity = 103/167 (61.68%), Postives = 105/167 (62.87%), Query Frame = -2 Query: 201 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 701 GIIKGTMTTTHSYTGDQ LNIVPTST + LRVPTPN VSKKTFAEEVNAAFRE+AD ELKGIL VCDEPLVSVDFRC VMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN WK Sbjct: 226 GIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALSSQALRGSSMALPLRVPTPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK 392
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.067e-45 Identity = 101/167 (60.48%), Postives = 104/167 (62.28%), Query Frame = -2 Query: 201 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 701 GIIKGTMTTTHSYTGDQ LNIVPTST LNGIALRVPTPN VSKKT AEEVN AFR++A NEL GIL VCD PLVSVDFRC VMGDDMVKVI+WYDNEWGYSQRVVDLADI AN WK Sbjct: 237 GIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVISWYDNEWGYSQRVVDLADICANQWK 403
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.389e-43 Identity = 97/167 (58.08%), Postives = 106/167 (63.47%), Query Frame = -2 Query: 204 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 701 GI+KGTMTTTHSYTGDQ LNIVPTST LNGIALRVPTPN V+KK AE+VNAAFR++AD LKG+L+VCDEPLVSVDFRC VMGDDMVKV+AWYDNEWGYSQRVVDLA +VANNW Sbjct: 225 GIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANNW 391
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.172e-41 Identity = 95/167 (56.89%), Postives = 103/167 (61.68%), Query Frame = -2 Query: 204 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 701 GI+KGTMTTTHSYTGDQ LNIVPTST LNGIALRVPTPN V+KK AE+VNAAFR++A+ LKGIL VCD PLVSVDFRC VMGDDMVKV+AWYDNEWGYSQRVVDLA +VAN W Sbjct: 256 GIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKW 422
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.205e-40 Identity = 90/166 (54.22%), Postives = 101/166 (60.84%), Query Frame = -2 Query: 204 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 701 GI+KGTMTTTHSYTGDQ LNIVPT+T LNGIALRVPTP V KKTFAEEVNAAFRE+A+ +KG+L V D PLVS+DF+C VMGDDMVKV+AWYDNEWGYSQRVVDLA++ A W Sbjct: 207 GIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVVDLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKCTDQSTSIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAEVTAKKW 372
BLAST of CX671867 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.020e-39 Identity = 92/167 (55.09%), Postives = 101/167 (60.48%), Query Frame = -2 Query: 204 GIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXLNIVPTSTXXXXXXXXXXXXXXXXLNGIALRVPTPNXXXXXXXXXVSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 701 GI+KGTMTTTHSYTGDQ LNIVPTST LNGIALRVPTPN V KK AE+VN AFR++A+ +KGIL VCD PLVSVDFRC VMGDDMVKV+AWYDNEWGYSQRVVDLA +VA+ W Sbjct: 252 GIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKW 418 The following BLAST results are available for this feature:
BLAST of CX671867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 298
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671867 ID=CX671867; Name=CX671867; organism=Citrus sinensis; type=EST; length=771bpback to top |