CX671840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.218e-43 Identity = 86/147 (58.50%), Postives = 95/147 (64.63%), Query Frame = -3 Query: 419 LSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQEPIN 859 LSQRR W ELVDR+A+SRP+SL +AYSRIR+NL YFKVNYVT AWIFLYLFRPSDQP+V+ GRTFSDRE VGSLL SALM+G IVC HGAFRVPEDLFLD+QEP N Sbjct: 44 LSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPAN 190 HSP 2 Score: 36.1946 bits (82), Expect = 2.218e-43 Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = -1 Query: 865 PIATPAFRAFLSRLSSSIR 921 P++TPAFR FLSRLSSSIR Sbjct: 23 PVSTPAFRTFLSRLSSSIR 41
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.417e-42 Identity = 84/147 (57.14%), Postives = 97/147 (65.99%), Query Frame = -3 Query: 419 LSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQEPIN 859 LSQRR W+EL+DR++M+RP+SL +A SRIRKNL+YFKVNYV LG W+FLYLFRPSDQP+V+FGRTFSDRE VGSLL SALM+G AIVC HGAF VP+DLFLDEQEP N Sbjct: 41 LSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQEPAN 187 HSP 2 Score: 33.8834 bits (76), Expect = 1.417e-42 Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = -1 Query: 859 PIATPAFRAFLSRLSSSIRYG 921 PI TPAFR F SRLS+SIR G Sbjct: 20 PINTPAFRTFFSRLSTSIRDG 40
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.797e-39 Identity = 82/147 (55.78%), Postives = 95/147 (64.63%), Query Frame = -3 Query: 419 LSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQEPIN 859 LSQRR W ELVDR++ +RPDSL +++SRIRKNL+YFKVNY LG+W+FLYLFR SDQP+VLFGR+FSDRE VGSLL SAL +G AIVC HGAFRVP+DLFLDEQEP N Sbjct: 43 LSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPAN 189 HSP 2 Score: 29.6462 bits (65), Expect = 1.797e-39 Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = -1 Query: 865 PIATPAFRAFLSRLSSSIR 921 PI + AFR FLSRLSSS+R Sbjct: 22 PINSHAFRTFLSRLSSSLR 40
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.340e-39 Identity = 77/145 (53.10%), Postives = 97/145 (66.90%), Query Frame = -3 Query: 425 LSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQEP 859 LS+RR W+EL DR+A+S+P+S+++A RIRKN SYFKVNY+T L +W+FLYLFRP+DQP+VLFGRTFSDRE VGS+L+SA+M+G A++CAHGAFR PEDLFLDEQEP Sbjct: 51 LSKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPEDLFLDEQEP 195 HSP 2 Score: 28.8758 bits (63), Expect = 2.340e-39 Identity = 10/21 (47.62%), Postives = 18/21 (85.71%), Query Frame = -1 Query: 859 PIATPAFRAFLSRLSSSIRYG 921 PIATPAFR F+++++ +++ G Sbjct: 30 PIATPAFRNFINQITETVKNG 50
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.066e-32 Identity = 70/144 (48.61%), Postives = 90/144 (62.50%), Query Frame = -3 Query: 428 LSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQE 859 LS+ R WSEL+DR+A ++PDSL+EA +R RKN SYF+VNYV +W+FLYLFRPSD+P++LFGR+FS+ E VGS+LISALM+G A +C HGAFR P+DLFLDEQ+ Sbjct: 51 LSRSRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDLFLDEQD 194
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PR1B6_ARATH (PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.806e-29 Identity = 69/142 (48.59%), Postives = 82/142 (57.75%), Query Frame = -3 Query: 422 RHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQEPI 847 R W+ELVDR+A SRP SL+EA SR+RKN SYF+ NY+T +W+FLY FRP+DQP+V+ GRTFSD E VGSLL+S L VG V HGAFR PEDLFL+EQE I Sbjct: 45 RPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPEDLFLEEQEAI 186
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.553e-11 Identity = 41/139 (29.50%), Postives = 63/139 (45.32%), Query Frame = -3 Query: 431 RHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQ 847 R W E++D +A+S P EA + ++ N+SYF+ NY WI LY R ++ +V+ G+ D+ VG ++ +L++G IV AHGAFR +DLFLDE+ Sbjct: 48 RPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEE 186
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11 Identity = 42/143 (29.37%), Postives = 62/143 (43.36%), Query Frame = -3 Query: 431 LSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQ 859 L+ RR W + D +M P +++A++RI+ NL+YF++NY + WIFLY R D+P+ LF DR ++ AL+ GA +V H R EDLFLDE+ Sbjct: 33 LATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173
BLAST of CX671840 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 42/143 (29.37%), Postives = 61/143 (42.66%), Query Frame = -3 Query: 431 LSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTXXXXXXXXXXXXXXXXXXXXXXXLGAWIFLYLFRPSDQPVVLFGRTFSDREXXXXXXXXXXXXXXXXXVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQ 859 L+ RR W + D +M+ P +A SRI+ NL YF+ NY + WIFLY R D+P+V+FG DR S ++ +L+ A +V H A R ++LFLDE+ Sbjct: 33 LATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEE 173 The following BLAST results are available for this feature:
BLAST of CX671840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671840 ID=CX671840; Name=CX671840; organism=Citrus sinensis; type=EST; length=924bpback to top |