CX671839

Overview
NameCX671839
Unique NameCX671839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: P2_ARATH (Probable NADP-dependent oxidoreductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2)

HSP 1 Score: 360.533 bits (924), Expect = 6.103e-99
Identity = 176/250 (70.40%), Postives = 209/250 (83.60%), Query Frame = 2
Query:   65 LVRNKQVILKDFVSGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGS--YVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT--APYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            +  NKQVI KD VSGFPKE+D   T +++EL+VP+GS  VL+KNLYLSCDPYMR RM   + S    +++ PG PI GYGV++V++S +P++ KGDL+WG+ GWEEYS+IT  A   FKIQHTDVPLSYYTG+LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE+DL+AALKR FP+GID+YFENVGGK LDAVL NM   GRIA
Sbjct:    1 MTTNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKPDPSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIA 250          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: P1_ARATH (Probable NADP-dependent oxidoreductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 8.813e-98
Identity = 172/248 (69.35%), Postives = 206/248 (83.06%), Query Frame = 2
Query:   74 NKQVILKDFVSGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGS---YVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT--APYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            NKQVILKD+VSGFP E+D   T +++EL+VP+G+N VL+KNLYLSCDPYMR RM   + S     +++ PG PI GYGV+++++S +P++ KGDL+WG+  WEEYS+IT      FKIQHTDVPLSYYTG+LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE+DL AALKR FP GID+YFENVGGK LDAVL NM + GRIA
Sbjct:    5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIA 252          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR1_RABIT (Prostaglandin reductase 1 OS=Oryctolagus cuniculus GN=PTGR1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.975e-45
Identity = 110/249 (44.18%), Postives = 150/249 (60.24%), Query Frame = 2
Query:   65 LVRNKQVILKDFVSGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            +VR K   LK    G P ++D  +   ++EL  P  +  VLL+ L+LS DPYMR       GS  +  K G  + G  VA+V++S+NP +  G LV   +GW  +S+     L K+       +PLS   G +GMPG+TAY G  E+C AK G+ V ++AA+GAVG +VGQ AK+ GC VVG+AGS++KVD LK K GFD AFNYK    L   LK+  P+G D YF+NVGG+  + V+  MK  GR+A
Sbjct:    1 MVRAKNWTLKKHFHGHPTDSDFEL--KTVELP-PLNNGEVLLEALFLSVDPYMRL------GS--KRLKEGDTMMGQQVARVVESKNPAWPVGTLVLAHSGWASHSISDGQQLEKLLTEWPDTLPLSLALGTVGMPGITAYFGLLEICGAKSGDTVLVNAAAGAVGAVVGQIAKIKGCRVVGAAGSEEKVDYLK-KIGFDFAFNYKTVKSLEETLKKAAPDGYDCYFDNVGGEFSNTVIRQMKKFGRVA 237          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR1_MOUSE (Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 5.074e-45
Identity = 113/253 (44.66%), Postives = 148/253 (58.50%), Query Frame = 2
Query:   65 LVRNKQVILKDFVSGFPKETDMYMTESSIELK---VPKGSNG-VLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQ---HTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            +V+ K   LK    GFP       T+ + ELK   +P  +NG VLL+ L+LS DPYMR           +  K G  + G  VA+V++S+N  F KG +V  + GW  +S+     L K+       +PLS   G +GMPG+TAY G  ++C  K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +KV  LK K GFD AFNYK    L  AL+   P+G D YF+NVGG+  +AV+  MK  GRIA
Sbjct:    1 MVQAKSWTLKKHFEGFP-------TDGNFELKTTELPPLNNGEVLLEALFLSVDPYMRVA--------AKKLKEGDRMMGEQVARVVESKNSAFPKGTIVAALLGWTSHSISDGNGLTKLPVEWPDKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVILQMKTFGRIA 237          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: YFMJ_BACSU (Putative NADP-dependent oxidoreductase yfmJ OS=Bacillus subtilis GN=yfmJ PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.296e-44
Identity = 99/207 (47.83%), Postives = 129/207 (62.32%), Query Frame = 2
Query:  155 LKVPKGSNG-VLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVL 772
            + VP+   G VL+K LY+S DPYMR RM   + SYVE F     +SG  +A+V+   N    KGD+V G   W+E+S ++   L KI  +  P S Y GILGM G+TAY G  ++   K GE V +S A+GAVG  VGQ AK+ G  VVG AGS +K+D LK +  FDEA NYK   D+  AL+   P+G+DVYF+NVGG   DAV+
Sbjct:   28 IPVPEPKQGEVLVKTLYVSVDPYMRGRMQDTK-SYVEPFALDKALSGGVIAEVVSDGN-HLKKGDIVIGNLSWQEFSAVSESALRKIDTSLAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVM 232          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR1_CAVPO (Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.610e-44
Identity = 108/249 (43.37%), Postives = 145/249 (58.23%), Query Frame = 2
Query:   65 LVRNKQVILKDFVSGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            +V+ K   LK    G P ++D  +   ++EL  P  +  VLL+ L+LS DPYMR           +  K G  + G  VA+V++S+N  F  G +V   +GW  + +     L K+       +PLS   G +GMPG+TAY G  EVC  K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +K+  LK + GFD AFNYK    L  ALK+  P+G D YF+NVGG+ L+ VL  MK  G+IA
Sbjct:    1 MVKAKSWTLKKHFQGKPTQSDFEL--KTVELP-PLKNGEVLLEALFLSVDPYMRIAS--------KRLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIA 237          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: YKM8_SCHPO (Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe GN=SPAPB24D3.08c PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.327e-44
Identity = 107/261 (41.00%), Postives = 154/261 (59.00%), Query Frame = 2
Query:   65 LVRNKQVILK---DFVSGFP--------KETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIE-GSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTD----VPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 799
            +V N  VI+K   D  +G+P        ++ +  +  + ++ + P     VLLKN+Y S DPY+R RM   +  SY+   + G P     VAKV+ S   ++  G  V  ++GWEEY+ ++   L  +Q  +    +PL  + G LGMP  TAY G   +   K GE ++ISAASGAVGQ+ GQ AK +G +VVGS GS +K  +  +  G+D  FNYK+E+    AL R  P+GID+YFENVGG+T+DAVL NM ++GRI
Sbjct:    1 MVSNNAVIIKKYLDSTAGYPVIGEHLAFEKREFDLENAQVDEETP-----VLLKNIYTSVDPYLRMRMQSPKHASYIPPLELGKPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYTFVSKQALGFLQPINNPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLAKAMGLHVVGSVGSDEKFKICLDS-GYDSVFNYKKESPFK-ALPRLCPKGIDIYFENVGGETMDAVLENMNLQGRI 254          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR1_RAT (Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 2.132e-43
Identity = 110/253 (43.48%), Postives = 147/253 (58.10%), Query Frame = 2
Query:   65 LVRNKQVILKDFVSGFPKETDMYMTESSIELK---VPKGSNG-VLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            +V+ K   LK    GFP       T+S+ EL+   +P  +NG VLL+ L+LS DPYMR           +  K G  + G  VA+V++S+N  F  G +V  + GW  +S+     L K+       +PLS   G +GMPG+TAY G  ++C  K GE V ++AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK K GFD AFNYK    L  AL+   P+G D YF+NVGG+  + V+  MK  GRIA
Sbjct:    1 MVQAKTWTLKKHFEGFP-------TDSNFELRTTELPPLNNGEVLLEALFLSVDPYMRVA--------AKKLKEGDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVILQMKTFGRIA 237          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR1_PIG (Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.784e-43
Identity = 111/253 (43.87%), Postives = 145/253 (57.31%), Query Frame = 2
Query:   65 LVRNKQVILKDFVSGFPKETDMYMTESSIELK---VPKGSNG-VLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            +VR K   LK    G+P       T S+ ELK   +P   NG VLL+ L+L+ DPYMR              K G  + G  VA+V++S+N  F  G +V  + GW  +S+     L ++       +PLS   G +GMPG+TAY G  ++C  K GE V ++AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK K+GFD AFNYK    L   LK+  PEG D YF+NVGG+  +AV   MK  GRIA
Sbjct:    1 MVRAKSWTLKKHFVGYP-------TPSNFELKTVELPPLKNGEVLLEALFLTVDPYMRIA--------ARKLKEGDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVACLK-KYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSNAVTSQMKKFGRIA 237          
BLAST of CX671839 vs. ExPASy Swiss-Prot
Match: PTGR1_BOVIN (Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.784e-43
Identity = 108/249 (43.37%), Postives = 141/249 (56.63%), Query Frame = 2
Query:   65 LVRNKQVILKDFVSGFPKETDMYMTESSIELKVPKGSNGVLLKNLYLSCDPYMRPRMTYIEGSYVESFKPGLPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 802
            +V  K   LK    G+P  +D  +   ++EL  P     VLL+ LYL+ DPYMR           +S K G  + G  VA+V++S+N  F  G +V   +GW  +S+     L K+       +PLS   G +GMPG+TAY G  ++C  K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +KV  LK K GFD A NYK    L  ALK   PEG D YF+NVGG+  +  +  MK  GRIA
Sbjct:    1 MVHAKSWTLKKHFVGYPTNSDFEL--KTVELP-PLKDGEVLLEALYLTVDPYMR--------IMAKSLKEGDMMMGEQVARVVESKNSAFPTGTIVLAPSGWTTHSISNGEKLEKVLAEWPDTLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGTAGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAITQMKKFGRIA 237          
The following BLAST results are available for this feature:
BLAST of CX671839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
P2_ARATH6.103e-9970.40Probable NADP-dependent oxidoreductase P2 OS=Arabi... [more]
P1_ARATH8.813e-9869.35Probable NADP-dependent oxidoreductase P1 OS=Arabi... [more]
PTGR1_RABIT2.975e-4544.18Prostaglandin reductase 1 OS=Oryctolagus cuniculus... [more]
PTGR1_MOUSE5.074e-4544.66Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1... [more]
YFMJ_BACSU4.296e-4447.83Putative NADP-dependent oxidoreductase yfmJ OS=Bac... [more]
PTGR1_CAVPO5.610e-4443.37Prostaglandin reductase 1 OS=Cavia porcellus GN=Pt... [more]
YKM8_SCHPO7.327e-4441.00Zinc-type alcohol dehydrogenase-like protein PB24D... [more]
PTGR1_RAT2.132e-4343.48Prostaglandin reductase 1 OS=Rattus norvegicus GN=... [more]
PTGR1_PIG2.784e-4343.87Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 P... [more]
PTGR1_BOVIN2.784e-4343.37Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D11-G21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671839 ID=CX671839; Name=CX671839; organism=Citrus sinensis; type=EST; length=806bp
CTGTATTTCCCATTAACCTAAACAGAAGGAGCAAAGAAAAAAAGAGAACC
AGAAAATGGCTGAATTGGTGAGGAACAAGCAAGTGATATTGAAGGACTTT
GTGTCTGGTTTCCCAAAAGAAACAGACATGTACATGACCGAAAGCTCCAT
AGAATTGAAGGTGCCAAAAGGTTCAAATGGGGTTCTTTTAAAGAACCTGT
ACTTGTCCTGTGATCCGTACATGCGACCAAGAATGACCTACATCGAAGGA
TCTTACGTTGAATCCTTTAAACCTGGCTTGCCCATAAGTGGATATGGGGT
GGCTAAAGTTTTGGATTCAGAGAATCCAGAGTTCAGCAAAGGTGACTTGG
TTTGGGGAATGACTGGATGGGAAGAGTATAGTCTCATTACGGCTCCATAC
TTGTTTAAAATTCAACACACAGATGTGCCTCTTTCTTACTATACTGGAAT
CCTTGGTATGCCTGGTATGACCGCTTACGTTGGATTTTATGAGGTCTGCT
CTGCTAAGCATGGAGAGTGTGTCTTCATATCAGCAGCATCTGGTGCAGTT
GGTCAGCTTGTGGGGCAGTTTGCAAAGTTATTGGGCTGCTATGTCGTCGG
AAGTGCTGGAAGCAAAGACAAGGTTGATCTACTGAAGAACAAGTTTGGGT
TCGACGAGGCATTTAACTATAAAGAAGAAGCTGATTTGAATGCAGCATTG
AAAAGGTACTTTCCCGAAGGAATTGATGTATATTTTGAAAACGTTGGTGG
AAAAACGCTTGACGCAGTGCTACCCAACATGAAAATCCGTGGTCGAATTG
CTGCAT
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