CX671830

Overview
NameCX671830
Unique NameCX671830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13690 contig Csv1_Contig13690:49..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.047e-65
Identity = 127/144 (88.19%), Postives = 132/144 (91.67%), Query Frame = -1
Query:  268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699
            VDVPVV GHAGVTILPLLSQVKP  S T  EI YLTDRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA VIECA+V+S VTELPFFASKVRLGR GIEE+YSLGPLNEYER GLEKAKKELAGSI+KGVSF+R
Sbjct:  212 VDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.263e-64
Identity = 123/145 (84.83%), Postives = 134/145 (92.41%), Query Frame = -1
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            VDVPVV GHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDA+VIEC++VAS VTEL FFA+KVRLGR G EE++ LGPLNEYER GLEKAK+ELAGSIQKGV F+RK
Sbjct:  214 VDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 2.263e-64
Identity = 123/145 (84.83%), Postives = 134/145 (92.41%), Query Frame = -1
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            VDVPVV GHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDA+VIEC++VAS VTEL FFA+KVRLGR G EE++ LGPLNEYER GLEKAK+ELAGSIQKGV F+RK
Sbjct:  214 VDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.860e-64
Identity = 123/144 (85.42%), Postives = 133/144 (92.36%), Query Frame = -1
Query:  268 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 699
            V+VPVV GHAGVTILPLLSQVKP  S T  EI+YLTDRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA V+ECA+V+S VTELPFFA+KVRLGR GI+E+YSLGPLNEYER GLEKAKKELAGSI+KGVSF+R
Sbjct:  212 VNVPVVGGHAGVTILPLLSQVKPPSSFTQEEINYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSSQVTELPFFATKVRLGRNGIDEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.860e-64
Identity = 123/145 (84.83%), Postives = 132/145 (91.03%), Query Frame = -1
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            VDVPVV GHAGVTILPLLSQVKP  S TP EI+YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDA+V+EC++VAS VTEL FFA+KVRLGR G EE+Y LGPLNEYER GLEKAK ELAGSIQKGV F+RK
Sbjct:  210 VDVPVVGGHAGVTILPLLSQVKPPSSFTPQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQVTELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDELAGSIQKGVEFIRK 354          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.600e-64
Identity = 121/145 (83.45%), Postives = 132/145 (91.03%), Query Frame = -1
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            V+VPVV GHAGVTILPLLSQVKP CS T  EI+YLTDRIQNGGTEVVEAKAGAGSATLSMAYAA +FADACLRGLRGDA+++ECAYVAS VTELPFFASKVRLGR GI+E+Y LGPLNEYER GLEKAKKEL+ SI KGV+F +K
Sbjct:  210 VEVPVVGGHAGVTILPLLSQVKPPCSFTQKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVTELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 5.574e-63
Identity = 121/145 (83.45%), Postives = 131/145 (90.34%), Query Frame = -1
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            V+VPV+ GHAGVTILPLLSQV P CS T  EI YLT RIQNGGTEVVEAKAGAGSATLSMAYAA+KFADACLRGLRGDA ++EC++VAS VTELPFFASKVRLGR GIEEI SLGPLNE+ERAGLEKAKKELA SIQKGV+F+ K
Sbjct:  212 VNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK 356          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 7.280e-63
Identity = 119/145 (82.07%), Postives = 128/145 (88.28%), Query Frame = -1
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            VDVPVV GHAG+TILPLLSQ+KP CS TP EI+YLT RIQNGG EVVEAKAGAGSATLSMAYAA KFADACL  LRGDA +IECAYVAS VTELPFFASKVRLGR G+EEI  LGPLN+YER  LEKAKKELA SI+KG+SF+RK
Sbjct:  209 VDVPVVGGHAGITILPLLSQIKPPCSFTPKEIEYLTGRIQNGGPEVVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAYVASQVTELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKKELAASIEKGISFIRK 353          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.288e-47
Identity = 94/145 (64.83%), Postives = 112/145 (77.24%), Query Frame = -1
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            V+VPV+ GHAGVTILPL SQ  P  +L+   +  LT R Q+GGTEVVEAKAG GSATLSMAYA A FADACL+GL G   VIEC+YV ST+TELPFFASKVRLG+ G+EE+  LGPL+++E+ GLE  K EL  SI+KGV F  +
Sbjct:  197 VNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKPELKSSIEKGVKFANQ 341          
BLAST of CX671830 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.552e-47
Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = -1
Query:  265 VDVPVVEGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 699
            V+VPVV GHAG+TILPL SQ  P  +L+   I  LT R Q+GGTEVVEAKAG GSATLSMAYA A FADACL+GL G  +V+EC++V ST+TELPFFASKVRLG+ G+EE+  LGPL+++E+ GLE  K EL  SI+KG+ F  +
Sbjct:  197 VNVPVVGGHAGITILPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAELKSSIEKGIKFANQ 341          
The following BLAST results are available for this feature:
BLAST of CX671830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDHG_CITLA2.047e-6588.19Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG2_BRANA2.263e-6484.83Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA2.263e-6484.83Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHG_CUCSA3.860e-6485.42Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG1_ARATH3.860e-6484.83Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG2_ARATH8.600e-6483.45Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG_ORYSJ5.574e-6383.45Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG_SOYBN7.280e-6382.07Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHM1_ARATH4.288e-4764.83Malate dehydrogenase 1, mitochondrial OS=Arabidops... [more]
MDHM2_ARATH9.552e-4763.45Malate dehydrogenase 2, mitochondrial OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D06-G11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671830 ID=CX671830; Name=CX671830; organism=Citrus sinensis; type=EST; length=699bp
ATTTTGAATTGATTAAAATGATAAGACAGGCGGCAGTTCGTCATCTACAT
ATTCTTTATCCATTCATTACAAGAATATCAAAAGAACCAAACCAACCCCA
CAAAGATGAATCTTTTGCTTCTTCTTTGTACCTAACTTAATTCCATCTGA
TTATGGAAAAACGAAAACCCTACCTCTTATTCTGGGGAAAGTAATCTTGA
GATATTTGAGGCAAACAACAAAAGCACAACCATTATCATTAGTCACCATG
TGATTGGTTACTCATTTCCTGACAAAACTGACTCCCTTCTGAATGCTTCC
CGCTAACTCTTTCTTTGCCTTCTCCAAACCAGCCCTCTCATACTCATTCA
ATGGGCCAAGTGAGTAAATTTCCTCAATTCCAGCACGGCCAAGCCGTACC
TTGGATGCAAAGAAAGGGAGTTCAGTCACCGTAGAAGCCACGTATGCACA
CTCAATAACACTGGCATCCCCCCTCAAACCTCGGAGACAAGCATCTGCAA
ACTTGGCAGCAGCATATGCCATGGATAGAGTGGCCGAACCAGCTCCAGCT
TTTGCCTCAACTACTTCTGTACCACCATTCTGGATACGATCTGTCAAGTA
GTCAATTTCTGTAGGGGTGAGAGAGCATGATGGTTTAACCTGAGATAAAA
GAGGTAAAATAGTAACCCCAGCATGACCCTCCACAACTGGAACATCAAC
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