CX671819

Overview
NameCX671819
Unique NameCX671819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5146 contig Csv1_Contig5146:108..946. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.802e-56
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = -1
Query:  525 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTV 839
            PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTV
Sbjct:  316 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTV 420          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 2.354e-56
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = -1
Query:  525 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTV 839
            PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPS+STV
Sbjct:  272 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTV 376          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.244e-56
Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = -1
Query:  525 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTV 839
            PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPS+STV
Sbjct:  308 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTV 412          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.526e-55
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = -1
Query:  528 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTST 839
            PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTS+
Sbjct:  313 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSS 416          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.203e-54
Identity = 98/104 (94.23%), Postives = 103/104 (99.04%), Query Frame = -1
Query:  528 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTST 839
            PTESERSLMERVRQELKHELKQGYKEK++DIREEILRKRRAGKLPGDTTS LK+WWQSH+KWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPS+ST
Sbjct:  256 PTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSST 359          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 5.079e-51
Identity = 92/103 (89.32%), Postives = 100/103 (97.09%), Query Frame = -1
Query:  528 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTST 836
            TE ERSL+ERVRQELKHELKQGY+EK+VDIREEILRKRRAGKLPGDT S LK+WWQ+HSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNP++S+
Sbjct:  201 TEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSS 303          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.930e-50
Identity = 92/104 (88.46%), Postives = 101/104 (97.12%), Query Frame = -1
Query:  528 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTST 839
            PTE ERSLMERV++ELKHELKQG+KEKIVDIREEI+RKRRAGKLPGDTTSVLK WW++HSKWPYPTEEDKA+LVQETGLQLKQINNWFINQRKRNW+SN STS+
Sbjct:  267 PTERERSLMERVKKELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNWNSNSSTSS 370          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOS2_ORYSJ (Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 7.334e-50
Identity = 90/102 (88.24%), Postives = 99/102 (97.06%), Query Frame = -1
Query:  531 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTS 836
            TE ERSL+ERVR ELK+ELKQGYKEK+VDIREEILRKRRAGKLPGDT S+LK+WWQ+HSKWPYPTE+DKARLVQETGLQLKQINNWFINQRKRNWHSNP++S
Sbjct:  192 TEGERSLVERVRHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSNPASS 293          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.806e-48
Identity = 87/105 (82.86%), Postives = 98/105 (93.33%), Query Frame = -1
Query:  525 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTV 839
            PT+SERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT++LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWH+N  TST+
Sbjct:  204 PTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSQTSTL 308          
BLAST of CX671819 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.590e-47
Identity = 85/104 (81.73%), Postives = 96/104 (92.31%), Query Frame = -1
Query:  528 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTST 839
            PTESERSLMERVRQELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWH+N  + T
Sbjct:  180 PTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLT 283          
The following BLAST results are available for this feature:
BLAST of CX671819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
KNAP3_MALDO1.802e-5699.05Homeobox protein knotted-1-like 3 OS=Malus domesti... [more]
KNAT4_ARATH2.354e-5699.05Homeobox protein knotted-1-like 4 OS=Arabidopsis t... [more]
KNAT3_ARATH5.244e-5698.10Homeobox protein knotted-1-like 3 OS=Arabidopsis t... [more]
LET12_SOLLC1.526e-5598.08Homeobox protein knotted-1-like LET12 OS=Solanum l... [more]
KNOSD_ORYSJ2.203e-5494.23Homeobox protein knotted-1-like 13 OS=Oryza sativa... [more]
KNOSB_ORYSJ5.079e-5189.32Homeobox protein knotted-1-like 11 OS=Oryza sativa... [more]
KNAT5_ARATH1.930e-5088.46Homeobox protein knotted-1-like 5 OS=Arabidopsis t... [more]
KNOS2_ORYSJ7.334e-5088.24Homeobox protein knotted-1-like 2 OS=Oryza sativa ... [more]
KNOS3_ORYSJ1.806e-4882.86Homeobox protein knotted-1-like 3 OS=Oryza sativa ... [more]
KNAT7_ARATH7.590e-4781.73Homeobox protein knotted-1-like 7 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13C12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13C12-E23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671819 ID=CX671819; Name=CX671819; organism=Citrus sinensis; type=EST; length=839bp
TTTTTTTTAACTACTAACTATTGAACTTCTTATACCATAAATAATGTTTG
CATATTTAATCTGCATTACAGTACCAAAAAAGGCTATAAGGAACTAAACA
AAAGATTATTGCACTGTACAACCTTGACCCTTCACTGTGCTTATTCACAG
ATATGATAAGCAAAAACAAAAATTATAAATCCACCACCAATATGCGACAA
TGGATTAACTCAGTTACAGTCATATAATTTCCCAAGTATTCATGTAGCTA
ATCATATGGCGTAGAATACGTGGCACCGTTTTACTTGCCTTTTAAGCATA
ACTGCAAAATGGTGTCAATTGCGTTCATAACAACCTCATCAGCCTCCTTG
TTTGCCAGTTTTGTTTTTCCTAGTTTCCAAAGCCGTTTCTGAAGCCCTAT
CTGTCACAGTTTCTATGTAATATGAGTATGTTGAATTTTATCACCCTGGC
ATTGAAGCATTGGATAGTCTTGCATTTACATGTAACGATCACTGCTGTTT
TCACCTCTTGCGTTTGCTTTTCAAGACTGTTGAAGTTGAAGGATTACTGT
GCCAGTTCCTCTTCCGCTGATTGATGAACCAATTATTGATCTGTTTTAAT
TGCAAACCGGTTTCCTGAACCAATCTTGCCTTATCTTCCTCAGTAGGGTA
TGGCCACTTGGAATGTGATTGCCACCAAGATTTGAGAACAGAGGTTGTGT
CACCAGGAAGTTTTCCGGCCCTTCTCTTGCGCAGAATTTCCTCTCTTATG
TCTACAATTTTCTCCTTGTAACCCTGTTTCAGTTCATGTTTCAACTCTTG
CCTCACGCGCTCCATCAAGGACCTCTCACTCTCTGTTGG
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