CX671808

Overview
NameCX671808
Unique NameCX671808
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671808_ssr18 microsatellite CX671808_ssr18:18..35. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT18_ARATH (Probable inorganic phosphate transporter 1-8 OS=Arabidopsis thaliana GN=PHT1-8 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.560e-56
Identity = 109/166 (65.66%), Postives = 126/166 (75.90%), Query Frame = -2
Query:  282 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKH--TNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWA-----SHDDNKV--NATGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKEDDSDA 752
            Y+ TV+FID+IGRV IQ +GFFFM VIYL  G+ YS+ WSKH   N GFM LY L FFF NFGPNTTTFI+PAE FPARFRSTCHGISGA GK+GAI+GTV FLWA     S D N++      + IA LILGGVC  G  +TYFFT+ETMGRSLEENE + D++A
Sbjct:  347 YWFTVYFIDKIGRVKIQIMGFFFMAVIYLVAGIPYSWYWSKHEHNNKGFMVLYGLVFFFCNFGPNTTTFIIPAEHFPARFRSTCHGISGAAGKLGAIVGTVGFLWATKKMESDDKNQIYPEVNRMRIAFLILGGVCIAGILVTYFFTKETMGRSLEENEHDQDNNA 512          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT19_ARATH (Probable inorganic phosphate transporter 1-9 OS=Arabidopsis thaliana GN=PHT1-9 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.728e-56
Identity = 107/157 (68.15%), Postives = 121/157 (77.07%), Query Frame = -2
Query:  297 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKH--TNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWAS---HDDNKVNATGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKE 752
            Y+ TV+FID+IGRV IQ +GFF M V+YL  G+ YS+ WSKH  TN GFM LY L FFF+NFGPNTTTFI+PAELFPARFRSTCHGISGA GK GAI+GTV FLWA+    +D   +   V IA LILGGVC  G  +TY FTRETMGRSLEENE E
Sbjct:  357 YWFTVYFIDKIGRVKIQMMGFFLMAVVYLVAGIPYSWYWSKHEKTNKGFMVLYGLIFFFSNFGPNTTTFIIPAELFPARFRSTCHGISGAAGKFGAIVGTVGFLWATRHHEEDGFPDVKRVRIAFLILGGVCIAGMIVTYLFTRETMGRSLEENEDE 513          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PT110_ORYSJ (Probable inorganic phosphate transporter 1-10 OS=Oryza sativa subsp. japonica GN=PHT1-10 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.116e-43
Identity = 87/158 (55.06%), Postives = 108/158 (68.35%), Query Frame = -2
Query:  297 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKH-TNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKE 752
            YFV V  IDR+GR  +Q  GF  M V   A+   Y   W  H  + G++ LY+LTFF AN GPNTTTFI+PAELFPARFRSTCHG+SGA GK+GA++G++ FLWAS   +   A      G+  AL +LGG+C +G A+TY FT ETM RSLEENE +
Sbjct:  356 YFVAVLLIDRVGRRCLQMAGFLLMAVFLFALAGPYDGYWRDHGAHAGYIVLYSLTFFSANLGPNTTTFILPAELFPARFRSTCHGLSGAAGKLGALVGSIGFLWASQQKDGAAAGHLPGIGMMYALFVLGGICLLGLALTYVFTPETMMRSLEENESD 513          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT19_ORYSJ (Probable inorganic phosphate transporter 1-9 OS=Oryza sativa subsp. japonica GN=PHT1-9 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.781e-41
Identity = 84/156 (53.85%), Postives = 104/156 (66.67%), Query Frame = -2
Query:  303 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNF-GFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENE 752
            YF  +  I+R GR  +Q  GF  M V   A+   Y   W  H    G++ LY+LTFF AN GPNTTTFI+PAELFPARFRSTCHG+SGA GK+GA++G++ FLWAS   +   A      G+  AL +LGG+C +G A+TY FT ETM RSLEENE
Sbjct:  368 YFAAMLLIERAGRRRLQMAGFLLMAVFLFALAGPYDGYWRDHAKTAGYIVLYSLTFFSANLGPNTTTFILPAELFPARFRSTCHGLSGAAGKLGALVGSIGFLWASQQKDGAAAGHLPGIGMMYALFVLGGICLLGLALTYAFTPETMTRSLEENE 523          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT18_ORYSJ (Probable inorganic phosphate transporter 1-8 OS=Oryza sativa subsp. japonica GN=PHT1-8 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.730e-40
Identity = 89/163 (54.60%), Postives = 109/163 (66.87%), Query Frame = -2
Query:  285 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEE--NEKEDDSD 752
            Y+ TVF ID +GR AIQ LGFF M V  L + V Y +  +K  + GF+ +YA TFFFANFGPN+TTFIVPAE+FPAR RSTCHGIS A GK GAIIG+  FL+A+ D +K +A      GV  +L +L G   +GF  T F   E+ G+SLEE   E EDD D
Sbjct:  364 YWFTVFLIDIVGRFAIQLLGFFMMTVFMLGLAVPYHHWTTKGNHIGFVVMYAFTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIIGSFGFLYAAQDPHKPDAGYKPGIGVRNSLFVLAGCNLLGFICT-FLVPESKGKSLEEMSGEAEDDDD 525          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT14_ARATH (Inorganic phosphate transporter 1-4 OS=Arabidopsis thaliana GN=PHT1-4 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.407e-38
Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = -2
Query:  282 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASH--DDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEE--NEKEDDSDA 752
            Y+ TV FID IGR AIQ +GFFFM V   A+ + Y++   K    GF+ +Y+LTFFFANFGPN TTF+VPAE+FPARFRSTCHGIS A GK+GA++G   FL+ +   D +K +A      GV  +L++LG V F+G   T F   E+ G+SLEE   E ED+ ++
Sbjct:  360 YWFTVAFIDVIGRFAIQMMGFFFMTVFMFALAIPYNHWTHKENRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQNPDKDKTDAGYPPGIGVRNSLIVLGVVNFLGILFT-FLVPESKGKSLEEMSGENEDNENS 524          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT12_ORYSJ (Inorganic phosphate transporter 1-2 OS=Oryza sativa subsp. japonica GN=PTH1-2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.662e-37
Identity = 85/161 (52.80%), Postives = 105/161 (65.22%), Query Frame = -2
Query:  285 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKEDDSD 752
            Y+ TV FID +GR  IQ +GFF M V  LA+GV Y +      + GF+ LYALTFFFANFGPN+TTFIVPAE+FPAR RSTCHGIS A GK GAIIG   FL+A+ D +  +A      G+  AL +L G  F+G  +T     E+ G SLEE  K++  D
Sbjct:  359 YWFTVAFIDIVGRFWIQIMGFFMMTVFMLALGVPYDHWTHPAHHTGFVVLYALTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAASGKAGAIIGAFGFLYAAQDQHNPDAGYSRGIGIRNALFVLAGTNFLGMLMT-LLVPESKGLSLEEMSKDNVVD 518          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT17_ARATH (Probable inorganic phosphate transporter 1-7 OS=Arabidopsis thaliana GN=PHT1-7 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.476e-37
Identity = 82/168 (48.81%), Postives = 107/168 (63.69%), Query Frame = -2
Query:  282 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVN-------ATGVTIALLILGGVCFMGFAITYFFTRETMGRSLE----ENEKEDDSDA 752
            Y+ TV FID IGR AIQ +GFFFM V   A+ + Y +   K    GF+ +Y+LTFFFANFGPN TTF+VPAE+FPARFRSTCHGIS A GK+GA++G   FL+ +   +K           GV  +L++LG V  +G   T     E+ G+SLE    ENE+ D+S +
Sbjct:  356 YWFTVAFIDVIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKENRIGFVAMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQSPDKTKTEHGYPPGIGVKNSLIVLGVVNLLGMVFT-LLVPESKGKSLEEMSGENEQNDESSS 522          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT14_ORYSJ (Probable inorganic phosphate transporter 1-4 OS=Oryza sativa subsp. japonica GN=PHT1-4 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.540e-37
Identity = 88/165 (53.33%), Postives = 106/165 (64.24%), Query Frame = -2
Query:  285 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWA--SHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEE--NEKEDDSD 752
            Y+ TVFFID IGR  IQ  GFFFM    L + V Y +  +   + GF+ +YA TFFFANFGPN+TTFIVPAE+FPAR RSTCHGIS A GK GAI+G+  FL+A  S D +K +A      GV  +L  L G   +GF  T F   E+ G+SLEE   E EDD D
Sbjct:  357 YWFTVFFIDIIGRFVIQLGGFFFMTAFMLGLAVPYHHWTTPGNHIGFVVMYAFTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYAAQSTDASKTDAGYPPGIGVRNSLFFLAGCNVIGFFFT-FLVPESKGKSLEELSGENEDDDD 520          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT14_ORYSI (Probable inorganic phosphate transporter 1-4 OS=Oryza sativa subsp. indica GN=PHT1-4 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.540e-37
Identity = 88/165 (53.33%), Postives = 106/165 (64.24%), Query Frame = -2
Query:  285 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWA--SHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEE--NEKEDDSD 752
            Y+ TVFFID IGR  IQ  GFFFM    L + V Y +  +   + GF+ +YA TFFFANFGPN+TTFIVPAE+FPAR RSTCHGIS A GK GAI+G+  FL+A  S D +K +A      GV  +L  L G   +GF  T F   E+ G+SLEE   E EDD D
Sbjct:  357 YWFTVFFIDIIGRFVIQLGGFFFMTAFMLGLAVPYHHWTTPGNHIGFVVMYAFTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYAAQSTDASKTDAGYPPGIGVRNSLFFLAGCNVIGFFFT-FLVPESKGKSLEELSGENEDDDD 520          
The following BLAST results are available for this feature:
BLAST of CX671808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PHT18_ARATH2.560e-5665.66Probable inorganic phosphate transporter 1-8 OS=Ar... [more]
PHT19_ARATH9.728e-5668.15Probable inorganic phosphate transporter 1-9 OS=Ar... [more]
PT110_ORYSJ1.116e-4355.06Probable inorganic phosphate transporter 1-10 OS=O... [more]
PHT19_ORYSJ1.781e-4153.85Probable inorganic phosphate transporter 1-9 OS=Or... [more]
PHT18_ORYSJ5.730e-4054.60Probable inorganic phosphate transporter 1-8 OS=Or... [more]
PHT14_ARATH2.407e-3851.20Inorganic phosphate transporter 1-4 OS=Arabidopsis... [more]
PHT12_ORYSJ2.662e-3752.80Inorganic phosphate transporter 1-2 OS=Oryza sativ... [more]
PHT17_ARATH3.476e-3748.81Probable inorganic phosphate transporter 1-7 OS=Ar... [more]
PHT14_ORYSJ4.540e-3753.33Probable inorganic phosphate transporter 1-4 OS=Or... [more]
PHT14_ORYSI4.540e-3753.33Probable inorganic phosphate transporter 1-4 OS=Or... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13C06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13C06-E11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671808 ID=CX671808; Name=CX671808; organism=Citrus sinensis; type=EST; length=753bp
TTTTAATGTTTATTTTGATATATATATATATATATTTATGTTACAACATG
CCTTTTCACTTCTAGTATACACAACGTTTTCAAGCTTAATTATGTTCTAC
AAATTAAAATTCCTTAATCACAGAATTCGTAAATCGCAAACCACATTTTG
ATACAATTTACATTAACACAGACGGAGAGTGATATTCTCTATGGAGCATC
AGCATTAACAGCAACTTCATTATTGTTGCGAGGTGAATTTGTTCGCAAGC
TTGATTTCGTGAGACATCTAAGAAAACACAGCGCATCGGAATCATCTTCT
TTCTCATTCTCCTCCAGTGATCTCCCCATTGTTTCACGGGTGAAAAAATA
AGTAATGGCGAATCCCATAAAACAAACACCACCCAAGATCAACAGTGCTA
TGGTCACTCCAGTCGCATTAACTTTGTTATCATCGTGTGAAGCCCACAAG
AAGGCTACTGTCCCAATTATGGCACCAACTTTTCCAAAAGCCCCCGAAAT
CCCATGACATGTTGATCTAAATCTTGCAGGAAATAGCTCAGCGGGCACAA
TGAAAGTTGTTGTATTGGGGCCAAAATTTGCAAAGAAAAATGTTAGGGCA
TAGAGGAACATGAATCCGAAATTGGTGTGCTTGCTCCATTTATAGCTATA
AAGTACCCCAATGGCTAAGTAAATTACCCCCATGAAGAAAAACCCTAGGG
CTTGGATTGCGACTCTGCCTATACGATCAATGAAAAAGACGGTGACAAAG
TAA
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