CX671801

Overview
NameCX671801
Unique NameCX671801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671801_ssr169 microsatellite CX671801_ssr169:169..180. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10852 contig Csv1_Contig10852:16..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671801 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.735e-30
Identity = 74/197 (37.56%), Postives = 112/197 (56.85%), Query Frame = 1
Query:   34 TAISFLVLTFATKP-LVGLAD----PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFST--ETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVG--VSNDHARRLALTN 594
            TA+  L+  F +K    G+A+    P++D +G++++    YY++S+I               + CP  VVQ  SD + GT + FS  D K  ++    D+N+ F    +  C+  TVWR+D+YD S GKW++TT GV+G PG  TL +WFK E+ G     YK   CPSVC+SC +LC+D+G    +D   RLAL++
Sbjct:    5 TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG--VLGYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSD 199          
BLAST of CX671801 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.190e-27
Identity = 74/200 (37.00%), Postives = 105/200 (52.50%), Query Frame = 1
Query:   28 FVTAISFLVLTFATKPLVGLAD----PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNE--LCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFSTETRCN--EPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVGVSNDH--ARRLALTN 594
            FV+A+    L  A  PL+  AD    P++D++G K+    +YY+V  +              N   +CP  VVQ   + +    L F   + K  ++    DLN+ FS    C     TVWR+D YD S G++F+T GGV+GNPG +T+ +WFK E   G    YK+V CP+VC SC   C DVG+  D    RRLAL++
Sbjct:   13 FVSAL----LAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGS-GFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of CX671801 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.904e-17
Identity = 63/172 (36.63%), Postives = 89/172 (51.74%), Query Frame = 1
Query:   94 PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNEL-CPLDVVQLSSDSERGTRLRFSMYD--KTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVGVSND--HARRLALTN 594
            P+VD++G  V    DY++VSAI              N+  CPL VVQ   D+  G  + FS     K +I+ E VDLNV+F+    CNE T W+VD + P    W +T GG +G  G ++  + FK ++  G   +YK   CPS   + +  CN+V +  D    RRL LTN
Sbjct:    5 PIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDN--GEPIIFSAIKNVKDNIVFESVDLNVKFNITINCNETTAWKVDRF-PGVIGWTVTLGGEKGYHGFESTHSMFKIKK-AGLPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTN 172          
BLAST of CX671801 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.574e-14
Identity = 47/168 (27.98%), Postives = 82/168 (48.81%), Query Frame = 1
Query:   88 ADPLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMYDKT-SIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVGVSNDHARRLAL 588
            A+ + D+ G  V    +YY+VSAI                +CP+ ++Q  SD + G  +RFS  +++   I  D +L + F  +  C E + W +       G+  +  GG E +P  + ++ +FK E++G     YK+V CP   +S    C+D+G++ +  R L L
Sbjct:    3 AEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVEKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGS--LAYKLVFCP---KSSSGSCSDIGINYEGRRSLVL 162          
BLAST of CX671801 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.039e-11
Identity = 52/184 (28.26%), Postives = 82/184 (44.57%), Query Frame = 1
Query:   88 ADPLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPL--DVVQLSSD-SERGTRLRF----SMYDKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDVGVSNDHA-RRLALTNGRALAVV 615
            A P++DV G ++++   Y ++S                N   P    + + +SD    GT +RF    S + +    NE +++    ST   C   T+W+V  YD S G   + TGG  G    Q   +WFK   +   +  Y +++CP    S    C+ VGV + +  RRLAL N   L V+
Sbjct:    5 ATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIG----QADSSWFKI--VKSSQLGYNLLYCPVTSSSDDQFCSKVGVVHQNGKRRLALVNENPLDVL 182          
The following BLAST results are available for this feature:
BLAST of CX671801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASP_THECC9.735e-3037.5621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.190e-2737.00Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA1.904e-1736.63Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE2.574e-1427.98Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPI2_SOLTU2.039e-1128.26Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13C02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13C02-E3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671801 ID=CX671801; Name=CX671801; organism=Citrus sinensis; type=EST; length=780bp
CTGAAAGATAACAAAATGAGTACTCCTTTTGTAACTGCAATCTCCTTCCT
TGTCCTTACCTTTGCCACAAAACCGCTTGTGGGACTCGCTGATCCTTTGG
TTGATGTCAATGGCAACAAGGTCGAAGCATCCCGAGACTACTATTTGGTC
TCAGCAATTCGAGGAGCAGGCGGCGGCGGCCTCACCCTCTTCAGGGGCAG
AAACGAACTCTGCCCACTTGATGTTGTCCAACTAAGTTCCGACTCAGAAA
GAGGAACCCGTTTAAGATTCTCAATGTATGATAAAACTAGTATTATCAAT
GAAGATGTGGATCTGAACGTGAGATTCTCGACAGAGACTCGCTGCAACGA
ACCAACAGTATGGAGAGTCGACAGCTATGATCCATCGAGAGGAAAATGGT
TTATAACAACTGGTGGTGTTGAAGGAAACCCTGGAGCTCAAACTTTGAAA
AACTGGTTTAAGTTTGAGAGAATTGGAGGAGATCGAGCTACGTACAAGAT
TGTTCACTGTCCTTCCGTTTGCGAATCCTGTGTATCTTTATGCAATGATG
TTGGGGTTTCTAACGATCATGCTCGACGTTTGGCTCTCACTAACGGGCGC
GCGCTTGCTGTTGTTCTAGTCCCTGGTAATGAGAGATCAGCCTCATGTGC
GTCTTGAATGCCCTTGTATCATTACTCTAAATAATGGATCGGGCTAGCTC
CTTGACGCTTATAACATAAACAAAAATGTCATTGCTAGCTAGTCTGTGTA
CCTTTGAACGAAATAAAAGTGGCGAATTTT
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