CX671795

Overview
NameCX671795
Unique NameCX671795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3227 contig Csv1_Contig3227:574..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.166e-73
Identity = 144/212 (67.92%), Postives = 159/212 (75.00%), Query Frame = 2
Query:  218 MASSGGGRFMAYXXXXXXXXXXXXXXXXXXXXX-----ILDQEKYLSELLAERHKLNPFLPVLPNTYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADVNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            +   GGGRFM Y                           ++QEKYLSELLAERHKL PFLPVLP+ +RLLNQEI+RVTTLL NA+VL QSGL+H SPL SGGIF N  AD+NG AS+F SE S  + SS   NWL+S GSSSGLI KRTIRVDIPV+ YPNFNFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +EEMMRGKPGYEH
Sbjct:   21 IGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSERS--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEH 230          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.088e-69
Identity = 141/209 (67.46%), Postives = 158/209 (75.60%), Query Frame = 2
Query:  227 SGGGRFMAYXXXXXXXXXXXXXXXXXXXXX-----ILDQEKYLSELLAERHKLNPFLPVLPNTYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADVNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            SGGGRF+ Y                          +++QEKYLSELLAERHKL PFLPVLP+  RL+NQEI+RVTTLL NA  L QS  +H SPL SGGIF N  AD+NG AS+F SE S  + SS A NWL+S GSSSGLIVKRTIRVDIPV+KYPN+NFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +E+MMRGKPGYEH
Sbjct:   20 SGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS--VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEH 224          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.310e-42
Identity = 92/179 (51.40%), Postives = 116/179 (64.80%), Query Frame = 2
Query:  320 LDQEKYLSELLAERHKLNPFLPVLPNTYRLLNQEIMRVTTLLGNASVLGQSGLEHASP--LTSGGIFSN----GGADVNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            +D  +YL+ELLAE  KL PF+ VLP   RLLNQE+ RV+ ++ N        L H SP  + S  + SN    G    NGL+    S   G+       +W  + GS S   VKR +R++IPV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEH
Sbjct:   27 IDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGM-----TMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEH 200          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.254e-41
Identity = 91/177 (51.41%), Postives = 115/177 (64.97%), Query Frame = 2
Query:  323 DQEKYLSELLAERHKLNPFLPVLPNTYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADVNGLASRFQSEISGLMQSS-----SAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            D+E+YL+ELL ER KL PFL V+PN  RLLN EI RV+      S       EH SP  S G  +NG  D+ G +     E   L ++S     S   W+   G  +  IVK+ IR+D+PV+KYP++NFVGR+LGPRGNSLKRVE +T CRV IRGRGS+KD  +EE ++GKPGYEH
Sbjct:   41 DRERYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEH 211          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.128e-41
Identity = 90/172 (52.33%), Postives = 110/172 (63.95%), Query Frame = 2
Query:  332 KYLSELLAERHKLNPFLPVLPNTYRLLNQEIMRVTTLLGNASVLGQSGLEHASP--LTSGGIFSN-GGADVNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            +Y+S+LLAE  KL PF+ VLP   RLLNQEI R+T ++ N        L H SP  + S  + SN  G  + G        I G      A  W  +  S S   VKR +R+D+PV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +EE ++GKPGYEH
Sbjct:   30 QYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG--PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEH 199          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKIA_XENLA (Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.668e-18
Identity = 46/112 (41.07%), Postives = 75/112 (66.96%), Query Frame = 2
Query:  506 GIFSNGGADVNGLASRFQSEI-SGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            GIF++    ++   SR + ++ +  M SSS +   S      G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EH
Sbjct:   36 GIFTHLERLLDEEISRVRKDMYNDTMNSSSNEKRTSELPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEH 147          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.267e-17
Identity = 42/111 (37.84%), Postives = 73/111 (65.77%), Query Frame = 2
Query:  506 GIFSNGGADVNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            GIF++    ++   SR + ++     + S +   +    + G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EH
Sbjct:   36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEH 146          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.267e-17
Identity = 42/111 (37.84%), Postives = 73/111 (65.77%), Query Frame = 2
Query:  506 GIFSNGGADVNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            GIF++    ++   SR + ++     + S +   +    + G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EH
Sbjct:   36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEH 146          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.267e-17
Identity = 42/111 (37.84%), Postives = 73/111 (65.77%), Query Frame = 2
Query:  506 GIFSNGGADVNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            GIF++    ++   SR + ++     + S +   +    + G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EH
Sbjct:   36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEH 146          
BLAST of CX671795 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.267e-17
Identity = 42/111 (37.84%), Postives = 73/111 (65.77%), Query Frame = 2
Query:  506 GIFSNGGADVNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEH 838
            GIF++    ++   SR + ++     + S +   +    + G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EH
Sbjct:   36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEH 146          
The following BLAST results are available for this feature:
BLAST of CX671795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
QKIL2_ARATH6.166e-7367.92KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKIL1_ARATH1.088e-6967.46KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL3_ARATH4.310e-4251.40KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKIL5_ARATH1.254e-4151.41KH domain-containing protein At1g09660 OS=Arabidop... [more]
QKIL4_ARATH8.128e-4152.33KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIA_XENLA5.668e-1841.07Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 ... [more]
QKI_RAT6.267e-1737.84Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_PIG6.267e-1737.84Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1[more]
QKI_MOUSE6.267e-1737.84Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1[more]
QKI_HUMAN6.267e-1737.84Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B11-C21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671795 ID=CX671795; Name=CX671795; organism=Citrus sinensis; type=EST; length=839bp
GTTAGATTAGCGAGTGTGTGTCTGGTCGGGATCATCCCACCAGCTACACA
AATCTGCAGACAGCCGAACGCCACCTTCGTCATCATCAATCATCGCAATC
TTCCGTCCGCCGTACGCTTCTCATCGTCGATCATACCGCTGAAGCCACCG
TCTGGATCTGATAAAGTGACCCGACGGCGACGACCGTAGACACTAACAGC
AGAAAACTAACTTAACGATGGCGTCATCAGGTGGAGGGAGGTTCATGGCC
TACTCGCTGTCACCTTCTGCTCCTCACTCTCCTCACCTCCCCTCTCTCCG
CTCCGCATCCTCCGCTATCCTCGATCAAGAAAAATATCTCTCTGAGTTAC
TAGCTGAGCGTCATAAGCTTAATCCATTCCTGCCTGTATTACCGAATACT
TACCGGCTGTTGAACCAGGAAATTATGCGTGTAACCACACTGTTGGGGAA
TGCATCAGTTTTAGGTCAAAGTGGGCTTGAACATGCTAGCCCTCTCACCT
CTGGAGGAATATTTTCAAATGGAGGAGCTGATGTGAATGGATTGGCATCA
CGGTTTCAATCAGAAATTTCTGGTTTAATGCAGTCATCATCAGCACAAAA
CTGGCTTAGCTCACAAGGTAGCTCATCGGGTCTTATTGTTAAGAGGACAA
TCAGAGTGGATATTCCAGTCGAAAAATATCCTAATTTCAACTTTGTCGGG
CGCCTCCTTGGTCCTCGAGGCAACTCGCTTAAGCGAGTCGAAGCTAGTAC
AGAATGCCGTGTTCTGATTAGGGGACGCGGCAGTATAAAGGATCCAGCAA
GGGAAGAAATGATGAGAGGAAAACCTGGGTATGAACATT
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